Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02927 ATGTGCAATGGTGTAGAATCTCGAGGGAATAGACATGACCTTGTGATGTCAAAGTTTGAGAATTACCATGAAGAGAGAATGCGAAATAGAGAATATGGAGATAGAGGTTTCATAAGCCATCTTCAACGTCTACATCATCATTTCAATGCCTTTCTTCCTACCATTTCAGTATCTGAGGTGAAAGAAGAGTTGAAATCACTTGCAAAAATTGCTTGTCCGATAACAATGACAAGCTTAATGATATATTCTCGATCAGCTATCTCAATGCTTTTCCTTGGTCACTTAGGAAAAGCAGAGTTAGCTGGCGGTTGCCTAGCACTCGGATTCGCCAACATAACAGCGAATTCAATTATGAAAGGCCTAACAATGGGAATGGATCCAATTTGTTGTCAAGCATATGGAGCCAAGAGATATGGAGTCCTAAACCAAACATTTTTCAAAACAGTCTGCCTACTCGTAATTGTCACAATCCCAATTTCAGTTTTATGGCTAAACATGGAACCCTTCCTTCAATTATTAGGTCAAGACCCACAAGTCACAAAAGTTGCACAAATATACATGATGTTCTCAATTCCTGAATTATTAGCTCAATCTATTCTTAACCCATTAAGAACTTTTCTAAGAACTCAAGGATTAACACCACCAATTACTATGGCTGCTTCATGTGCTGCAATATTACACCTTCCAATAAATTATCTCCTAGCTACATATTTAAAATTAGGTGTAAAGGGTATTGCATTAGCCACTGGATTTAATTCAATAAACATAACATCAATAATGTTGGTTTATATTGTTTGCTCAAAAAAGCCACTAAAACCATGGAAAGGTGTTAACATGATTTCAATATTTCAAGGATGGAAACCATTGCTTAGTCTTGCAATTCCAAGTTGCCTTTCAGTTTGTTTAGAATGGTGGTGGTATGAGATAATGCTTTTTCTATGTGGTTTATTAAGTAACCCACAAAATTCAGTTTCAACAATGGGAATACTAATTCAAACACTTGGTTTTCTATATGTGTTTCCATTTTCACTTAGTGCTGCTTTGACAACAAGAATTGGTCATTCATTAGGTGCAGGACAACCCTCACGTGCACAAGGAACAGCTATAATTGGATTTGTGATAGCTTTTATACTTGGAGTTTCAGCTTTTATTGGGTTGATTTTAGTGAGGAAAAATTGGGGGAAATTATTTACTGATGAGATACAAATTATTGATATGATAAGAAATGTTTTACCAATTTTGGGGTTATGTGAAATTAGCAATTGGTCACAAACAGTGTCATGTGGGATTTTAGCTGGAACTGCAAGACCTTATGTTGGTGCTAGGATTAATTTGTGTGCATTTTATTTGATTGGGTTACCAGTTTCTATTTTTGCAACATTTGTTTACAAATTTGAATTGGTAGGTTTGTGGTATGGAATGTTGGCAGCACAAATTTCTTGTGTTTGTATGATGGTGATTACTTTGATTCAAACTGATTGGGGACAACAAACTAGAAGAGCAGTGGAGTTAGCTAAGAAAACAACAGAGCAAGATTGTGTAATTGATGAGGAAATTGTTTCTTGA 1566 0.3557 MCNGVESRGNRHDLVMSKFENYHEERMRNREYGDRGFISHLQRLHHHFNAFLPTISVSEVKEELKSLAKIACPITMTSLMIYSRSAISMLFLGHLGKAELAGGCLALGFANITANSIMKGLTMGMDPICCQAYGAKRYGVLNQTFFKTVCLLVIVTIPISVLWLNMEPFLQLLGQDPQVTKVAQIYMMFSIPELLAQSILNPLRTFLRTQGLTPPITMAASCAAILHLPINYLLATYLKLGVKGIALATGFNSINITSIMLVYIVCSKKPLKPWKGVNMISIFQGWKPLLSLAIPSCLSVCLEWWWYEIMLFLCGLLSNPQNSVSTMGILIQTLGFLYVFPFSLSAALTTRIGHSLGAGQPSRAQGTAIIGFVIAFILGVSAFIGLILVRKNWGKLFTDEIQIIDMIRNVLPILGLCEISNWSQTVSCGILAGTARPYVGARINLCAFYLIGLPVSIFATFVYKFELVGLWYGMLAAQISCVCMMVITLIQTDWGQQTRRAVELAKKTTEQDCVIDEEIVS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02927 521 Pfam MatE 295 456 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car06g02927 521 Pfam MatE 73 233 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car06g02927 521 PANTHER MULTIDRUG RESISTANCE PROTEIN 47 510 - -
Car06g02927 521 TIGRFAM matE: MATE efflux family protein 73 471 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car06g02927 521 PANTHER PROTEIN DETOXIFICATION 53 47 510 - -
Car06g02927 521 CDD MATE_eukaryotic 63 500 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02927 Car-Chr6 47926544 47931344 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02927 K03327 - gmx:106798137 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02927 06 47926544 47931344 Car06g02927 06 47926544 47931344 ECH