Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g02920 | ATGACCTTAACTATACAAAACTCAAATCTTCCTCTCCCAACAATATCATTTGGTAGTAACATTGGTGTAGGTAAAGAGAAGAAGAAGAAGTTAAAGTTGGAGAGTGATAGATTATGGATTAAATTGTCAAGTACAACTATTCAATTTCAAAATATAATTTGGGTAATTTATTCCATTGCCACCGTTTCCATTTTCTTCTTCTCCAACCCATTCATTAGTTGCACCAGACGCAGATTTCCAACACATTGCCCTACCTCCTCACCAAAAGAGACTATGGAGGGCAAAATAGGGCTTTTATTTATGATTGTGTTGGTTTCTGCTTGGGCTTGTGATGCAAGAGAGCTAGCAAACCCTGAATTAAACATAACATCAGATGTGTGTTCACTTTGTGAGGAATATACTACTAAGGCACTTAATTATATAAAAGATAACAACACTCAGGCAGAAATCATTGATGGCCTTCACAATACTTGCTATCAGCTTCTGTCTTTCAAGAAGCAGTGCATTGAGTTGGTGGATTATTATGCTCCACTTTTCTTCTCAAAAATAGCTCTAATTAAGCCTGGAGAACTCTGCGAGAAGTTCAACCTTTGTGAGTCTGCAAAGGCTTCTTCACAAGTTCAAGGAAATAGCTGTGGCCTTTGCAAAGACGCTGTTGCAGCATTATTGGTTGAGTTGAACGATCCTGACACTAAGCTAGAGATAATGGAGAAACTACTGAAGGCATGCAAATCTTTGGAGAAGTATGCAAAGGAGTGCAAGAAGATCGTTTTCGAGTATGGACCTTTGATTCTAATCAATGCAGAGAAATTCCTAAAGACAGCAGATATATGCACCACATTACATGCCTGCCCTGCTTCCATTGTTATTAGCCAGGAAGCTACAATCATGGAAGAAATACCAATGCTTTCTGACTCTTAA | 921 | 0.3844 | MTLTIQNSNLPLPTISFGSNIGVGKEKKKKLKLESDRLWIKLSSTTIQFQNIIWVIYSIATVSIFFFSNPFISCTRRRFPTHCPTSSPKETMEGKIGLLFMIVLVSAWACDARELANPELNITSDVCSLCEEYTTKALNYIKDNNTQAEIIDGLHNTCYQLLSFKKQCIELVDYYAPLFFSKIALIKPGELCEKFNLCESAKASSQVQGNSCGLCKDAVAALLVELNDPDTKLEIMEKLLKACKSLEKYAKECKKIVFEYGPLILINAEKFLKTADICTTLHACPASIVISQEATIMEEIPMLSDS | 306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g02920 | 306 | Gene3D | - | 122 | 199 | - | - | |
| Car06g02920 | 306 | SUPERFAMILY | Saposin | 125 | 200 | IPR011001 | - | |
| Car06g02920 | 306 | SMART | sapb_4 | 210 | 284 | IPR008139 | - | |
| Car06g02920 | 306 | SMART | sapb_4 | 125 | 198 | IPR008139 | - | |
| Car06g02920 | 306 | PANTHER | SAPOSIN-RELATED | 92 | 294 | - | - | |
| Car06g02920 | 306 | ProSiteProfiles | Saposin B type domain profile. | 123 | 202 | IPR008139 | - | |
| Car06g02920 | 306 | ProSiteProfiles | Saposin B type domain profile. | 208 | 288 | IPR008139 | - | |
| Car06g02920 | 306 | SUPERFAMILY | Saposin | 209 | 286 | IPR011001 | - | |
| Car06g02920 | 306 | Pfam | Saposin-like type B, region 1 | 212 | 246 | IPR007856 | GO:0006629 | |
| Car06g02920 | 306 | Pfam | Saposin-like type B, region 1 | 125 | 161 | IPR007856 | GO:0006629 | |
| Car06g02920 | 306 | Pfam | Saposin-like type B, region 2 | 251 | 284 | IPR008138 | - | |
| Car06g02920 | 306 | PRINTS | Saposin signature | 262 | 285 | IPR008373 | GO:0005764|GO:0006665 | |
| Car06g02920 | 306 | PRINTS | Saposin signature | 127 | 147 | IPR008373 | GO:0005764|GO:0006665 | |
| Car06g02920 | 306 | PRINTS | Saposin signature | 209 | 231 | IPR008373 | GO:0005764|GO:0006665 | |
| Car06g02920 | 306 | PANTHER | SAPOSIN-RELATED | 92 | 294 | - | - | |
| Car06g02920 | 306 | Gene3D | - | 207 | 287 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car06g02920 | Car-Chr6 | 47339898 | 47346576 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car06g02920 | K12382 | - | gmx:100527899 | 300.441 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car06g02920 | 06 | 47339898 | 47346576 | Car06g02920 | 06 | 47339898 | 47346576 | ECH |