Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02914 ATGGTTAACATGAAGTTAGCATGTGTTGTTGTGATGTGCATGGCAATGTTGTATGCACAAACTGGTGGTGCATTAACATGTGGACAAATCTCAAATAACCTTGTTCCATGCGTAGGTTATCTTCAATATGGTGGTCTGATTTCAAAGCGTTGCTGTGACGGCGTTAAAAGCATTGCGAATGACGCTACGACCACCCCTGCCCGCCGTTTTACTTGCAACTGCTTGAAATCGGCTGCTGCTGCTGTTAAGAAAATCAACCCAAACAACGCTCAGTTACTTCCCGGAAAATGTGGTGTTAATATCCCTTATAAGATCAGCACTTCCACCAACTGTGCTAGTATCAAATGA 348 0.4339 MVNMKLACVVVMCMAMLYAQTGGALTCGQISNNLVPCVGYLQYGGLISKRCCDGVKSIANDATTTPARRFTCNCLKSAAAAVKKINPNNAQLLPGKCGVNIPYKISTSTNCASIK 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02914 115 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 113 IPR036312 -
Car06g02914 115 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 113 - -
Car06g02914 115 ProSitePatterns Plant lipid transfer proteins signature. 93 114 IPR000528 GO:0006869|GO:0008289
Car06g02914 115 CDD nsLTP1 25 111 - -
Car06g02914 115 Gene3D - 24 115 IPR036312 -
Car06g02914 115 PRINTS Plant phospholipid transfer protein signature 26 42 IPR000528 GO:0006869|GO:0008289
Car06g02914 115 PRINTS Plant phospholipid transfer protein signature 46 60 IPR000528 GO:0006869|GO:0008289
Car06g02914 115 PRINTS Plant phospholipid transfer protein signature 67 82 IPR000528 GO:0006869|GO:0008289
Car06g02914 115 PRINTS Plant phospholipid transfer protein signature 84 101 IPR000528 GO:0006869|GO:0008289
Car06g02914 115 PRINTS Plant phospholipid transfer protein signature 102 113 IPR000528 GO:0006869|GO:0008289
Car06g02914 115 PANTHER - 1 113 IPR000528 GO:0006869|GO:0008289
Car06g02914 115 SMART aai_6 27 111 IPR016140 -
Car06g02914 115 Pfam Protease inhibitor/seed storage/LTP family 27 111 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02914 Car-Chr6 47065648 47068557 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02914 16 115 Acyl Lipid Metabolism Gene Families AT5G59310 53.000 4.81e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02914 - - gmx:100776812 151.754