Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02822 ATGAAGCTCGTTTGGTCTCCAGAAACTGCCTTAAAGTCTTACATAGATACCGTTAAATCCTTTGAAAAATTCAAAGAACCCGGAATAGCTGAGCTTCTATCATCCATGGCAGCAGGATGGAACGCAAAATTCATAGTGGAATGTTATTCCCACGGCGGCCCAATTGCCGCAAGTATCGGCCTAGCAGTTGCCGCTCGCAACACGGGTGCACGACACGTATGCATAGTCCCAGATGAAGGGTCAAGATTACACTACACAAAAGCCCTAGCCGATATGGGAGTATCGCCGCCACCGGAGATAGTTCCCGGGGAAGCGGAGACGGTGATCAAAAGCTTAGATGGGTTGGATTTTCTTGTGGTGGATTGTAGACTTAGAGATTTTGCTAGGGTTCTTAAAGTCGCGAAGGTTAGTACAAGAGGGGCAGTTTTGGCATGTAAAAATGTATGGCAAAGAAATCTTTCTTGGTTTCAATGGAATATGGTTCTTGAAAGAGGCACACGTGTGGTTAGATCGGTCTTTTTACCTGTTGGAAAGGGTTTGGATATTGCTTACATAGGGAGTAGAAACGGTGTAACTTCATCTAGTACTTCAAAGGGTACTCCTAGCCGTTGGATCAAGCACATAGATCATCAATCAGGAGAAGTTCATCTCTTTAGAGGGAGTAATGTTTAA 672 0.4464 MKLVWSPETALKSYIDTVKSFEKFKEPGIAELLSSMAAGWNAKFIVECYSHGGPIAASIGLAVAARNTGARHVCIVPDEGSRLHYTKALADMGVSPPPEIVPGEAETVIKSLDGLDFLVVDCRLRDFARVLKVAKVSTRGAVLACKNVWQRNLSWFQWNMVLERGTRVVRSVFLPVGKGLDIAYIGSRNGVTSSSTSKGTPSRWIKHIDHQSGEVHLFRGSNV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02822 223 Pfam Protein of unknown function (DUF1442) 1 219 IPR009902 -
Car06g02822 223 PANTHER DUF1442 FAMILY PROTEIN 1 219 IPR009902 -
Car06g02822 223 Gene3D Vaccinia Virus protein VP39 7 185 IPR029063 -
Car06g02822 223 PANTHER ANKYRIN REPEAT/KH DOMAIN PROTEIN (DUF1442) 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02822 Car-Chr6 41562725 41564441 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02822 - - gmx:100794419 329.331