Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02740 ATGAATTATTCAGGCTACAACCCTAACcaacaacaaccacagcaacaacaacaacaTTCTTATTACGAATACGACCCATCTCAGATTCAAGTTCAACCCTACGATCATTCTTATGCTGCAGCATATCAATCTTCGTATTACGCGTATAATCCTCAATACGCTTATTATCCAGCCGATACTACACAGGTTCAACAACCTCATCTTCATTATCAACCTGAACCCGCTCCGGTTCATCCTCCTGGTGTTAACCCTGAACCGGTTCAACCTACATTCAACCATCTTCCGATCGGGCCTTCTCAATACAGAGGTAGGGGTGGTAGATCATTCAGGCGGGgtggtcgtggtcgaggtcagttaagtcatggtagaggacgtggAGTGGGAGGTGGGAGACACTTTCCATCTGGGCTTGCTATTTCTGATGCACCGGGTGCATCTGCTGCTGCCGGAGGTTCATTGTCGGTCTCAGCTCAAGCAGTGCAACCACCGCAACGTATGGTATGTTGTGAAATTTGTAAGGTTGAGTGCAATACTCAAGAAGTCATGGAGCTGCATAAGAAAGGAAAGAAGCATCTGAAGAATGTGAGAATACATGAAGCAAAACAGAGATGCAATGCTATCAATGGACCACAGAATGGGCAGATTCCTACCTCTGAATTGAACTCAACAGATCAACCTGTGGTAGCTCAGGACTCTGAGGACCCTACCAAAAATATGAGTTCTGAAACTACTGCTGATAATGACAAGGTTGAAATAATGTCGCAGAATAATGTAGGAGAGACTTCTGAAGTTCCAGCTGAAGAGCCTGATGAGTTAAGAATGGAAAACTCTGGTGCAAGAGGCCGTGGATTGAAGCGTAAGATAAGAGGAGGAAAAGGACGTAAACAGATGAGGACTGCTGATGGTTCAAACCCAACGCAAGTTTCTAAACCTGAACAAGCTCTAGCTTATACATGTGAGTTGTGCAATGTTAAATGTGATACCCAAACTGTTTACCAGAGTCATCTTTCTGGGAAAAAGCACTTGAAGCGTGCCTATGGAAATCAAGCTTTTGTCGGAGTAGCTAACCAAGCTTCAGTTGGAATAGGTAACCAAACTTTGTCTGAAGTAGGTCCCCAAGCTTTATCTGGAGTAGTAGGGCTTCAAGCAATTTACCCACCTGACATCAATGCTCTAGCTGAAGCAATTAATGCCCAAGTCCAACAAGGTGATAATGATCCACAGGTACTTCTGGCTCAGCTCCTGATGAATGTACTATCTCAAGCCCAAGGATCGGCAACAGCACCACCAAATGGCTCCTTGGCTGGTCAGACACCGACACTGACATCTGTGGCTGGTTCTAGTTCCCAGTTGGCGTTGGTGCAGACACAAGCCTCGGAAATCGCAGTGCATGTTGGGATGGAAAACCCTAATGGTGAATCAAAAAATGAGACGTTATCTGTCCCACTGGAGTCAAATGCACATGAAGATTCAAATGTTGGCACCCAAATTGAAGGTGAAAGTTCTGAAATGAAATAG 1518 0.4269 MNYSGYNPNQQQPQQQQQHSYYEYDPSQIQVQPYDHSYAAAYQSSYYAYNPQYAYYPADTTQVQQPHLHYQPEPAPVHPPGVNPEPVQPTFNHLPIGPSQYRGRGGRSFRRGGRGRGQLSHGRGRGVGGGRHFPSGLAISDAPGASAAAGGSLSVSAQAVQPPQRMVCCEICKVECNTQEVMELHKKGKKHLKNVRIHEAKQRCNAINGPQNGQIPTSELNSTDQPVVAQDSEDPTKNMSSETTADNDKVEIMSQNNVGETSEVPAEEPDELRMENSGARGRGLKRKIRGGKGRKQMRTADGSNPTQVSKPEQALAYTCELCNVKCDTQTVYQSHLSGKKHLKRAYGNQAFVGVANQASVGIGNQTLSEVGPQALSGVVGLQAIYPPDINALAEAINAQVQQGDNDPQVLLAQLLMNVLSQAQGSATAPPNGSLAGQTPTLTSVAGSSSQLALVQTQASEIAVHVGMENPNGESKNETLSVPLESNAHEDSNVGTQIEGESSEMK 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02740 505 MobiDBLite consensus disorder prediction 1 20 - -
Car06g02740 505 MobiDBLite consensus disorder prediction 471 505 - -
Car06g02740 505 SMART ZnF_U1_5 164 198 IPR003604 GO:0003676|GO:0008270
Car06g02740 505 SMART ZnF_U1_5 314 349 IPR003604 GO:0003676|GO:0008270
Car06g02740 505 MobiDBLite consensus disorder prediction 266 282 - -
Car06g02740 505 MobiDBLite consensus disorder prediction 94 129 - -
Car06g02740 505 PANTHER OS06G0651300 PROTEIN-RELATED 371 470 - -
Car06g02740 505 PANTHER OS06G0651300 PROTEIN-RELATED 92 356 - -
Car06g02740 505 MobiDBLite consensus disorder prediction 205 245 - -
Car06g02740 505 SUPERFAMILY beta-beta-alpha zinc fingers 312 344 IPR036236 -
Car06g02740 505 MobiDBLite consensus disorder prediction 257 309 - -
Car06g02740 505 SMART c2h2final6 317 341 IPR013087 -
Car06g02740 505 SMART c2h2final6 167 191 IPR013087 -
Car06g02740 505 Pfam Zinc-finger of C2H2 type 317 341 - -
Car06g02740 505 Pfam Zinc-finger of C2H2 type 169 191 - -
Car06g02740 505 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 371 470 - -
Car06g02740 505 PANTHER GLUTENIN, HIGH MOLECULAR WEIGHT SUBUNIT 12-LIKE 92 356 - -
Car06g02740 505 MobiDBLite consensus disorder prediction 204 245 - -
Car06g02740 505 MobiDBLite consensus disorder prediction 467 505 - -
Car06g02740 505 Gene3D Classic Zinc Finger 155 199 - -
Car06g02740 505 Gene3D Classic Zinc Finger 294 346 - -
Car06g02740 505 SUPERFAMILY beta-beta-alpha zinc fingers 149 203 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02740 Car-Chr6 37447603 37453405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02740 - - lja:Lj0g3v0199689.1 406.757