Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02734 ATGGGTTACTCAGCTTTGGTAAGTAAGCTTGTCTGTTTTGCAATTTTGTGCCTCGTGACTTTCGGTCCCAAGGCGGAAGGAGCTGTGACATGTGGTCAAGTTGTGAACAACTTAACCTCTTGTGTTTCTTACATTATGTATGGTGGGAACACTGTGCCTGCGCAGTGTTGCAATGGAGTAAGAAACCTTAATGCCATGGCTCAAACCACCCCAGACCGTAGAGCTGTTTGTAGCTGCATTAAGAATGCTGTTAGCTCAAGTGGTTTCACTTACTCTAATACAAACCTTAACCTTGCTGCTAGTCTTCCAAGGAGATGTGGGGTTAACATTCCTTACCAGATCAGCCCCAATACCGACTGCAACAGTGTGCACTGA 375 0.456 MGYSALVSKLVCFAILCLVTFGPKAEGAVTCGQVVNNLTSCVSYIMYGGNTVPAQCCNGVRNLNAMAQTTPDRRAVCSCIKNAVSSSGFTYSNTNLNLAASLPRRCGVNIPYQISPNTDCNSVH 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02734 124 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 123 IPR036312 -
Car06g02734 124 CDD nsLTP1 29 121 - -
Car06g02734 124 PRINTS Plant phospholipid transfer protein signature 30 46 IPR000528 GO:0006869|GO:0008289
Car06g02734 124 PRINTS Plant phospholipid transfer protein signature 51 65 IPR000528 GO:0006869|GO:0008289
Car06g02734 124 PRINTS Plant phospholipid transfer protein signature 93 110 IPR000528 GO:0006869|GO:0008289
Car06g02734 124 PRINTS Plant phospholipid transfer protein signature 111 122 IPR000528 GO:0006869|GO:0008289
Car06g02734 124 PANTHER - 9 122 IPR000528 GO:0006869|GO:0008289
Car06g02734 124 Pfam Protease inhibitor/seed storage/LTP family 31 120 IPR016140 -
Car06g02734 124 SMART aai_6 31 120 IPR016140 -
Car06g02734 124 ProSitePatterns Plant lipid transfer proteins signature. 102 123 IPR000528 GO:0006869|GO:0008289
Car06g02734 124 Gene3D - 28 124 IPR036312 -
Car06g02734 124 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 10-RELATED 9 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02734 Car-Chr6 37089490 37091149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02734 5 124 Acyl Lipid Metabolism Gene Families AT2G38540 44.628 6.68e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02734 - - gmx:100793733 177.563