Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02706 ATGGCGGACTTGCCGGAGAATCGCCGGCACTCTTCTTCCAGTTCATCTAGTGCGAGCGATCTATCTGTCAGAGTGGACCGTGAACTAGATACCGGAAACGGAAGCACTAGCAAGGAAGTTGAGGATATTACCGAAGCGGTTTCCAATGGAGTTTCCATTAACAACGGCAGTGGTAGTTCTTCAGCATCAGGTATTCCTAGCAGGGGGTTGCCCAAAGTGACCACATTGCCAGTAGACATAACCCATGGAGGTAAATTGGTGTCAAGTTCAAGTAAGTTTAACTTGGAACGGTCAAAAACAGAGAGGCAGAGACATCTAAGGCCTGAGGATGCAGCACAAATTTTTGATGACAAAATTCCTGTACAGGAAAAGCTTAAATTGTTGAACAGAATAGCTACTGTAAAAGATGATGGAACTGTAGAATTTGATGTTCCCATAGATGTTGAACCTGAAGCTCTTGGTGCTCGATCCAAACATGTAAATAATGTTATTGATGATTCAGTTGGTCGTGCAACAGACCTTGATTACATCCCTCCATTAAATATAGTGATGCTTATTGTTGGCACACGGGGAGATGTACAGCCGTTTGTCGCAATAGGGAAACGCTTACAGGATTATGGTCATCGTGTTAGATTAGCAACTCATTCAAATTTTAAGGAGTTTGTTTTGACAGCTGGGTTGGAGTTTTATCCATTAGGGGGCGATCCAAAAGTCCTTGCTGGCTATATGGTTAAAAATAAGGGCTTTTTGCCATCGGGACCCTCTGATATACCTACTCAGCGAAATCAAATGAAAGAAATTATCAACTCTCTGCTTCCTGCTTGCAAAGAGGCTGATATTGATTCTGGTGTGCCCTTTAAAGCAGATGCAATCATTGCCAATCCCCCAGCATATGGGCATACTCACGTTGCAGAGGCACTAAAAATTCCGATTCATATTTTTTTCACAATGCCATGGACGCCAACAGCTGAATTTCCACATCCTTTGTCTCGTGTAAAGCAACCGGCTGGTTATAGGCTTTCATATCAAATAGTTGACTCGTTAATTTGGCTCGGAATACGAGACATGATTAATGATCTTAGGAAGAAAAAGTTGAAGCTACGACCAGTCACATATTTAAGTGGCTCACAAGGTTCTGAAACTGATATTCCTCATGCTTATATATGGAGTCCTCATCTTGTTCCTAAACCAAAAGATTGGGGACCGAAAATCGATGTAGTAGGGTTTTGCTTTCTTGATCTAGCATCAAATTACGAACCTCCCGAACCCCTTGTAAAATGGCTTGAAGATGGCGATAAACCTATTTACATTGGGTTTGGTAGCCTGCCTGTTCAAGATCCAAAAAAAATGACAGAAATTATTGTAGAAGCACTTGAGACCACGGGACAGAGGGGAATCATCAATAAAGGATGGGGAGGTCTTGGGAATTTGACAGAACCAAAGGACTCCATCTACTTATTGGATAATATTCCCCATGATTGGCTATTTTTACACTGCAAAGCAGTGGTGCATCATGGTGGAGCAGGAACAACAGCTGCAGGGCTGAAAGCTTCTTGCCCAACAACTATAGTTCCTTTTTTTGGTGATCAACCCTTTTGGGGTGAGAGAGTACATGCTAGAGGAGTCGGCCCTCCACCTATCCCAGTTGACGAGTTTTCGCTTCCTAAGTTGACTGATGCCATAAATTTTATGCTAGATCCCAAGGTAAAGGACCGTGCAATTGAACTTGCCAAAGCCATGGAAAATGAGGATGGCGTAACTGGAGCTGTGAAAGCATTTTTTAAGCAGCTTCCTCAAAAGAAAACTGACACTGATACAGATCCACCGTCTTCTAGTATATTCTCTATAAGTAGATGTTTTGGTTGTTCCTGA 1872 0.4252 MADLPENRRHSSSSSSSASDLSVRVDRELDTGNGSTSKEVEDITEAVSNGVSINNGSGSSSASGIPSRGLPKVTTLPVDITHGGKLVSSSSKFNLERSKTERQRHLRPEDAAQIFDDKIPVQEKLKLLNRIATVKDDGTVEFDVPIDVEPEALGARSKHVNNVIDDSVGRATDLDYIPPLNIVMLIVGTRGDVQPFVAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSDIPTQRNQMKEIINSLLPACKEADIDSGVPFKADAIIANPPAYGHTHVAEALKIPIHIFFTMPWTPTAEFPHPLSRVKQPAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGSQGSETDIPHAYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNYEPPEPLVKWLEDGDKPIYIGFGSLPVQDPKKMTEIIVEALETTGQRGIINKGWGGLGNLTEPKDSIYLLDNIPHDWLFLHCKAVVHHGGAGTTAAGLKASCPTTIVPFFGDQPFWGERVHARGVGPPPIPVDEFSLPKLTDAINFMLDPKVKDRAIELAKAMENEDGVTGAVKAFFKQLPQKKTDTDTDPPSSSIFSISRCFGCS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02706 623 MobiDBLite consensus disorder prediction 36 68 - -
Car06g02706 623 Pfam Glycosyltransferase family 28 N-terminal domain 182 325 IPR004276 GO:0005975|GO:0016758|GO:0030259
Car06g02706 623 MobiDBLite consensus disorder prediction 7 22 - -
Car06g02706 623 CDD GT1_Gtf-like 180 595 IPR002213 GO:0008194
Car06g02706 623 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 435 577 IPR002213 GO:0008194
Car06g02706 623 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 181 593 - -
Car06g02706 623 MobiDBLite consensus disorder prediction 1 70 - -
Car06g02706 623 Gene3D Glycogen Phosphorylase B; 182 585 - -
Car06g02706 623 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE UGT80A2-LIKE ISOFORM X1 11 623 - -
Car06g02706 623 Gene3D Glycogen Phosphorylase B; 411 580 - -
Car06g02706 623 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 11 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02706 Car-Chr6 35958614 35981994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02706 94 623 Glycosyltransferase AT3G07020 80.187 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02706 K05841 - gmx:100812490 1025.77