Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02626 ATGATGTATTGGCTTAAACGAACCCTTTCCAAAAGTCCCACAAATCCAGCACAATCAAACTCCACAGCAGGacaacaaccagaacaacaacatcaCGGGATTACTGATCAACTCATAAACCACGTCAAATCTTTCACCATTGACACCTTCAAAAATTTCCCTCTCCAAGATGAAGATGAAGCCACTTATAGTAAAGAAGTTGAATCTAATTCAACCAGAGTTCGAAATGATCTTTCTCAGTGGCAAGAGAGACATGCAGTTCTCATACTCTCAACAGTTAAGGAAATATCACATCTGAGATATGTACTATGTCCTCGCCATTTGAAGGAAAATCAATTCTGGAAAATATACTTTACGCTTACTAAGAGCCATCTTGCCCCATATGAGCTACGTGCCATACAACAAGAGAAACTGAAACAGATGGCAATGGAAGATGATAAATCTTCAGATAACCATCCATACGAAATTGAAATGGCAGAAGCAAAGCACGGGAACTTCATAGAGCCTTTGCCACCCTCGTAG 522 0.3831 MMYWLKRTLSKSPTNPAQSNSTAGQQPEQQHHGITDQLINHVKSFTIDTFKNFPLQDEDEATYSKEVESNSTRVRNDLSQWQERHAVLILSTVKEISHLRYVLCPRHLKENQFWKIYFTLTKSHLAPYELRAIQQEKLKQMAMEDDKSSDNHPYEIEMAEAKHGNFIEPLPPS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02626 173 SMART wurzfinal6 73 125 IPR005607 -
Car06g02626 173 Pfam BSD domain 78 125 IPR005607 -
Car06g02626 173 Gene3D BSD domain 51 137 IPR035925 -
Car06g02626 173 ProSiteProfiles BSD domain profile. 68 125 IPR005607 -
Car06g02626 173 PANTHER OS04G0662000 PROTEIN 2 168 - -
Car06g02626 173 PANTHER BSD DOMAIN-CONTAINING PROTEIN 2 168 - -
Car06g02626 173 SUPERFAMILY BSD domain-like 33 130 IPR035925 -
Car06g02626 173 MobiDBLite consensus disorder prediction 9 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02626 Car-Chr6 32571847 32577633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02626 33 153 EF-hand Containing Proteins AT1G69030 48.760 2.42e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02626 - - gmx:100805729 248.44