Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02580 ATGGGGTTATTGCGTGGAATTCAAATCCCTTATCCGTTGTTATATAAAGGATTGAAAGCCACATCTACAACCCATCAAAATCTCCTACCAATATCTTCAAACTCTCATCAAACCCTTTTCCATTCTCAATCCCTAATGGGTATGGTATTTGGAAAAATTGGTGTTGAGACACCAAAATATGAGGTAATCAAAACAACACAAGATTATGAAATCAGAAAATATGCACCTTCTGTAGCTGCTGAAGTCACATATGATCCATCAGAATTCAAAGGCAACAAAGATGGTGGATTTATGGTTTTAGCAAATTATATTGGAGCTTTAGGGAACCCTCAAAACACAAAACCTGAAAAGATTGCTATGACAGCACCAGTTATCACAAAGGAAACAACTTTATCAGAGAAGATTCCGATGACGGCACCGGTTGTTACAAAGAGTGGTGGTGATGAGACAAATAAGAAGGTCACTATGCAGTTTATTTTGCCATCTAACTATGGAAAAGGTGAAGAGGCACCTAAGCCTATTGATGAGAGGGTTGTGATAAGAGAAGAAGGTGAGAGGGTTTATGGAGTGGTGAAGTTTGGAGGTGTGGCTAGTGATGATGTTGTGAAGGAGAAGGTGGAGAAGTTGAGTTTGAGTTTGGAGAAAGATGGTTTTAAGGTTGTTGGGGATTTTTTGTTGGCTAGGTATAATCCACCTTGGACTATACCAGTTTTCAGGACTAATGAGGTTATGATTCCTGTTGAATGA 747 0.3896 MGLLRGIQIPYPLLYKGLKATSTTHQNLLPISSNSHQTLFHSQSLMGMVFGKIGVETPKYEVIKTTQDYEIRKYAPSVAAEVTYDPSEFKGNKDGGFMVLANYIGALGNPQNTKPEKIAMTAPVITKETTLSEKIPMTAPVVTKSGGDETNKKVTMQFILPSNYGKGEEAPKPIDERVVIREEGERVYGVVKFGGVASDDVVKEKVEKLSLSLEKDGFKVVGDFLLARYNPPWTIPVFRTNEVMIPVE 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02580 248 Pfam SOUL heme-binding protein 55 126 IPR006917 -
Car06g02580 248 Pfam SOUL heme-binding protein 131 246 IPR006917 -
Car06g02580 248 PANTHER HEME-BINDING PROTEIN-RELATED 47 248 IPR006917 -
Car06g02580 248 SUPERFAMILY Probable bacterial effector-binding domain 46 248 IPR011256 -
Car06g02580 248 Gene3D Regulatory factor, effector binding domain 54 130 IPR011256 -
Car06g02580 248 Gene3D Regulatory factor, effector binding domain 131 248 IPR011256 -
Car06g02580 248 PANTHER - 47 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02580 Car-Chr6 30799164 30800274 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02580 - - ccaj:109799602 341.658