Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02573 ATGAAAGGAGGGGCACTGCTGCTTCAACTATGGAATCCACCACCACGTTTCCACActctctctctcccatctctctcctctcctcttcctctctcaatctcCGCCACCCAACAACAACAACTCCTCACAGCTAAAGAGAGAAGACAGTTAAGAAACGAACGAAGAGAGAGCAGTAACTGGAGAGAAGAAGTTGAAGATAAACTCATTAAGAAGACTAAGAAAGAGAATAAATCATGGATGGATGAACTCAACCTTGATAATTTAATGAAATTGGGTCCTCAATGGTGGGTTGTTCGTGTTTCGCGTGTTAAGGGTCACTATACTGCTGAAGTTCTCGCTCGTTCTTTGGCTAAGTTTTTTCCTGACATGGATTTTAAGGTATATGCTCCTGCTATCCATGAGAAAAGGAGATTGAAGAATGGTTCCTACTCCGTTAAACCAAAGCCTCTTTTCCCGGGTTGTATTTTTCTGAGATGTGCGTTGAACAAACCACTGCATGATTACATAAGAGAGTATGATGGTGTTGGTGGCTTTATTGGATCCAAGGTTGGAAATACAAAAAGACAGATTAATAAACCAAGGCCAGTATCTGAGGAAGATATGGAAGCAATCTTCAGACAGGCAAAAGAACAACAAGAAAATGCCGACAAACTATTTGAGGAAGAAGAGAAAAATGCTGTCCTAAACTCTGGGAAATCCAATAAAGAGTTAGAACTAGATGTTTCAAAAACCATTGTCGATTCTAAGCCTAAAAGGGGTTCGAGAAAAACATCTATCCAGGCCACAGTCACAGAAGCTACACCTTCTAAACCGGATTATAAACTTCTTGTTGCGGGTTCCACTGTTCGTATTATATCTGGATCGTTTTCAGGGTTTGCAGGTACCCTCAAGAAGCTGAATCGCAGATCCAAAATGGCAACGGTGCATTTAACCATATTCGGGAAAGAGAACATAGTAGACCTAGATGTTAGTGAAATTGCTCCAGAGACTAATGAATCCCTTTAG 1005 0.3891 MKGGALLLQLWNPPPRFHTLSLPSLSSPLPLSISATQQQQLLTAKERRQLRNERRESSNWREEVEDKLIKKTKKENKSWMDELNLDNLMKLGPQWWVVRVSRVKGHYTAEVLARSLAKFFPDMDFKVYAPAIHEKRRLKNGSYSVKPKPLFPGCIFLRCALNKPLHDYIREYDGVGGFIGSKVGNTKRQINKPRPVSEEDMEAIFRQAKEQQENADKLFEEEEKNAVLNSGKSNKELELDVSKTIVDSKPKRGSRKTSIQATVTEATPSKPDYKLLVAGSTVRIISGSFSGFAGTLKKLNRRSKMATVHLTIFGKENIVDLDVSEIAPETNESL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02573 334 CDD KOW_NusG 276 326 - -
Car06g02573 334 Pfam Transcription termination factor nusG 94 204 IPR006645 GO:0140673
Car06g02573 334 PANTHER TRANSCRIPTION ANTITERMINATION PROTEIN RFAH 33 328 - -
Car06g02573 334 CDD NGN_plant 94 205 - -
Car06g02573 334 Gene3D - 93 210 IPR036735 GO:0006355
Car06g02573 334 Gene3D - 276 328 IPR014722 -
Car06g02573 334 PANTHER RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG 33 328 IPR043425 -
Car06g02573 334 SMART nusgn_4 92 208 IPR006645 GO:0140673
Car06g02573 334 SUPERFAMILY Translation proteins SH3-like domain 277 326 IPR008991 -
Car06g02573 334 Coils Coil 201 225 - -
Car06g02573 334 SUPERFAMILY N-utilization substance G protein NusG, N-terminal domain 93 210 IPR036735 GO:0006355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02573 - - lja:Lj0g3v0333779.1 466.463