Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02513 ATGGTAGGACCATTGAGACCTCAAATTGTGTTGTTTGGTTCTTCCATTGTTCAACTTAGTTACAGTGATGAAGGTTGGGGAGCTATTCTTACAAATTTGTATGCTCGCAAGGCAGATATAATCCTGAGAGGATATTGTGGATGGAATTCAAGACGTGCTTTGAAGGTTTTGGATACAATATTTCCTAAGGATGCAGCTGAGCAACCATCATTGGTTATTGTGTACTTTGGTGGCAATGATTCTATGCATCCACATCCATCTGGCCTTGGTCCTCATGTACCACTTGAAGAATACATTGAAAATATGAAGAAGATTATAATCCATCTTAAGAGCCTGTCAAAGAAGACTCGCATAATTTTACTCAGCTCTCCACCAGTTAATGAGGCACAAATTCATGAAACATTCAGTAACATATTTGGGCCAATAAAGAGGACAAATGAATCATGTAGACTTTATTCAGAAGCATGTTTGGAGTTGTGTCATGAGATGAATGTCAAAGCCATTGACCTCTGGTCTGCACTTCAACAAAGGGATGACTGGTCAAACGTTTGCTTCATAGATGGAATTCATTTGTCACATGAGGGGAACAAGATAGTGGTAAAAGAGATATTGAAGGTCCTTGAAGAAGCAGACTGGGAACCTAGTCTACACTGGAAATCAATGCCAAATGAGTTTGCAGAAGATTCACCATATGATCCAGTTGGTATGGATGAAAAAACTACTGTAAATATCTCCAATTGGTACTTCGAGAAAAAGTTCCAATGGGAAAGAGATTTGTGTAAACCATTGAATGGCCTTCAAATTGAAGAATCAGCTGTTACAAAACAGCAAGGTCTATAA 840 0.3857 MVGPLRPQIVLFGSSIVQLSYSDEGWGAILTNLYARKADIILRGYCGWNSRRALKVLDTIFPKDAAEQPSLVIVYFGGNDSMHPHPSGLGPHVPLEEYIENMKKIIIHLKSLSKKTRIILLSSPPVNEAQIHETFSNIFGPIKRTNESCRLYSEACLELCHEMNVKAIDLWSALQQRDDWSNVCFIDGIHLSHEGNKIVVKEILKVLEEADWEPSLHWKSMPNEFAEDSPYDPVGMDEKTTVNISNWYFEKKFQWERDLCKPLNGLQIEESAVTKQQGL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02513 279 Coils Coil 95 115 - -
Car06g02513 279 Pfam GDSL-like Lipase/Acylhydrolase family 11 198 IPR013830 -
Car06g02513 279 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 251 - -
Car06g02513 279 SUPERFAMILY SGNH hydrolase 6 207 - -
Car06g02513 279 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 251 IPR045136 -
Car06g02513 279 CDD Isoamyl_acetate_hydrolase_like 8 207 - -
Car06g02513 279 Gene3D SGNH hydrolase 6 234 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02513 Car-Chr6 29252076 29256109 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02513 K23978 - gmx:100796512 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02513 06 29252076 29256109 Car06g02513 06 29252076 29256109 ECH
Car03g01278 03 57412989 57416483 Car06g02513 06 29252076 29256109 PCT