Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02509 ATGGTTGGACAATCCAAGGCCGCAACTTCGCGCGAAAAGCTTTCAAGTCTCGTCCATAGAGCCAAATTGGCCATTGATATACCTTCAAAGCTCGAAGCATTGCGGAAATTGAAAATTGAACTTCCTCAAGAAGATCCAGTTCTTCTCACTGAGTTCCTCCCTCCGATTTTCGACTTCCTCTCTGATGATTTCAGTCCTGTTCGTAAATTCGTCACCGAGATGGTTGGTGAAATTGGATTGAAGAACACTGAATTCTTGCCTGATATTGTGCCTGTGTTGATTGATGTCTTGGATGATGATACACCAGCTGTTATTCGTCAAGTTATTCTGTGCGGAATTGATTTGTTTCGATCCACACTTGAGAAAATCACGATACAGGGTCTATATTCTAGTGATTTAGACAGCGCACTTGAATCTGCATGGGAGTGGATGGTTAAATTCAAAGAAAAAGTATACTCAATAGCATTTCAAGATGGAAGGGGTGGAGCAAAGCTTCTGGCACTGAAGTTTGTTGAAGCAGTGATTCATCTTTACACACCTGATCCTAATGGTTCCTCAGAGCCCACTTCCCATCAAGGAAAGCCACCGGAATTTAATGTATCATGGCTGAGGCGGGGTCATCCTGTACTTAAGTATGGAGATTTGTCAATTGAAGCCAGTCATAGTTTGGGTCTCTTGCTTGATCAACTCAGATTTCCAACTGTGAAGTCTCTTAGTAACTCAGTAATCATTGTGCTAATTAAAAGCCTTTCAGCCATTGCAATAGACAGGCCTGCATTCTATAGCCGAATATTGCCAGTTTTGCTCAGTTTGGAACCCTCAAGCTCTGTTGTTAATGGGGTCTGTGTGTCAGCAGCACATCTTGCTCTAAAGAAGGCCTTTCTTACGTGCACAAAATGTACACATCCAAGTGCTGCCCCGTGGAGAGATCGGTTGGGAGGTGCCTTGAAGGAGATGCAGTCCGAAGGGAAGGCAGATCAAGTGTTCCACGCAATCTCTGCAAGTAATGGAAGTATCTTACAGAGAGCGGAGGATTATCAATCAGTTATCAAGGAAGAGGATGCTGCAGTAAATTCATTTGATTCAGGGCACGTTAATTTGGTAAGGAAACGGTCAGGATCAGAAAATGGAGGCGATTTAACTGGAGATGCAGATGTCCCTGGTAAACGTGTTAGAACAACAACCGAAGGTTTCAAAGAACCTAAAAATGAGTTAGATGAAAGTACTGCTAACACACTGGATGACTCTCCTTCAGCTCTACCAGCATCTTCAAAAGGAGATGAGGAAAATGGGCCTGTACTGCAGCTTGTTGCCATGTTTGGTGCTTTGGTTGCTCAAGGTGAAAAGGCTGTTGCGTCTTTGGAAATTCTTATCTCCAGTATTTCTGCCGACTTACTAGCTGAAGTAGTGATGGCAAATATGCGTAACCTACCTCCAAATTGCCCTAATGCTGAAGGAAACGATGAACAGTTGCATGACATTAGTATATTTGGTTCTCATGACAAGGCTAAATATCCACCATCGTTTGTGGCTGGTGTTATGTCACTTTCTAGTACTTTCCCGCCTGTTGCTTCACTTCTTGATGCTCATCAATCAGTGTCCAATGACTTAGTGAAGTCTCATGGGGAGGAAGAAATTTCTACAACTGGAGTAGATAGTAGTGCTATGCATTCTGGCATGATTCTTTCATCTCAAAATGTACCATCGCCTACTGATTTTCCGTCTTCTGATACCTGTATACCTGGAGTGGAGAATGTCAGCACATCTGTGCCTATTGACATAGATGATGATGGCAACTTAGAGAGTGGAATCCCTGGCCTGGATTCTTTTGGTCGAAATGATGCATTGTCAGAAACTTTGGCTGCTTCCTCATTAGCTTCCAGTGATTTACAAATAGAAGAGGAGCAAGTTACGAGTTTGGATAAAAGGTCACCCCTGAACATAGTTCCATCAACATCGGCAGATAGGTCTGAGGAGCTGAGCCCAAAAGCAGTTGCTACAGATGTCAATAGCTTGGTGTCCTCAACTGCTACTTCAGTTGTGTTGCCTACTCGCTTAGTCTTGCCAAAGATGATTGCTCCAGTTGTTGATCTTGCAGATGAACAAAAGGATCATTTGCAAATATCATGTTTTATGCGTATCATTGATGCATATAAGCACATAGCTACAGCTGGAGGCTCAAAAGTTCGATTTTCGATACTTGCTTATTTAGGAGTTGAGTTTCCTTTGGAATTAGACCCGTGGAAATTATTACAAAAGCATATTTTGATTGATTACTCTAGTCATGAGGGACATGAGTTGACGTTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGCGGAGCCTGACTTTTTTTCTTCCACAACTGCAGCTTCTGTATATGAAACATTCCTCCTAACAGTGGCAGAAGCACTAAGAGATTCTTTTCCACCTTCGGATAAATCGTTAAGTAAATTGCTTGGTGAATCTCCTTATTTGCCAAAATCAGTTTTAAAAATTGTAGAGAACATGTGTTCTCCTGGAAATGGGGATAAAGTTGAAAAGGAATCGCACACATTGAATGCGGATAGAGTTACTCAAGGTCTAAGTGCTGTATGGAGTTTGGTTCTTCTAAGACCTCCCATTCGAGATACTTGTTTAAAAATTGCTTTACAGAGTGCAGTGCATCACTTGGAAGAAGTGCGTATGAAGGCAATACGGCTGGTGGCAAATAAACTTTATCCTTTATCATCCATTTCTCGGCAAATAGAAGAGTTTGCAAAGGAAACGTTGTTCTCAGTGATGAGTGATGCATCTGAGGCTACTGATGCTGAAGGATCCGTTGCTGATTCACAAAAGGGACCTGATATTGAAAAGCTGACAAATGAACCATTATCTTTGAGTGGCAATACTAAGGATGTCTTAGATAATCGGCAATCAAGCACATCTGAGGGCACCTCACCAGTTTCAGTTTCTGAGGCTCAGAGGGGCATGTCATTGTATTTTGCTTTATGCACAAAGAAACATTCCCTCTTTCGCGAAATATTTGTCATCTATAAAAGCACATCAAAAGCAGCAAAGCAGGCTATTCATCGTCAAATTCCCATACTAGTGCGTACCTTAGGTTCATCTTCAGATCTCCTTGAAATTATATCAGATCCCCCGAATGGAAGTGAGAATCTCCTAATGCAGGTGTTGCATACACTTACAGATGGTACGATCCCTTCTAAGGATTTGATATATACTGTGAAAAGGTTACATGATACAAAACTTAAGGATGCAGAGATTCTTATTCCAATATTGCCATTCCTATCAAAAGATGAGGTAATGCCGGTTTTTCCCCACATTGTTAATGTTCCTTTGGAGAAGTTCCAAGGAGCACTTAGTCGGGTATTGCAGGGATCGTCCCAATCTGGTCCGGTGCTTACTCCAGCTGAAATATTGATTGCAATTCATGGAATTGATCCTGAAAGAGATGGAATTGCCTTAAAAAAGGTAACTGATGCATGCAATGCTTGCTTTGAGCAGCGACAAACTTTTACTCAAGAAGTTCTTGCCAAAGTTTTGAATCAATTGGTTGAGCAAATTCCTCTTCCTTTACTGTTCATGCGTACAGTATTACAAGCAATAGGTGCTTTTCCAACACTGGTGGACTTTATCATGGGTATTCTTTCCCGCCTCGTCAAGAAGCAGATATGGAAATATCCAAAGTTGTGGGTGGGATTCTTGAAGTGTCTGCAATTGACGAAACCTCAATCATTTGGTGTTCTGCTTCAGCTACCTCCACCACAATTGGAAGCTGCATTAAATAGAATTGCTGCACTGAAGGCACCATTGATTGCTCATGCTAGCCAGCCAGATATACAATCTTCACTTCCCAGGTCTGTGCTGGTTGTTCTCGGCATTGTTTCTGATTCTCAGGTTTCAAGTCAGACACAAACTAGCCAAACACAAACTGGTGAGACAAGCAACTCAGATAAGGACACAATGACAGAAAAATCTAAAGAATCATCTACAGCAAGCTAA 4008 0.4192 MVGQSKAATSREKLSSLVHRAKLAIDIPSKLEALRKLKIELPQEDPVLLTEFLPPIFDFLSDDFSPVRKFVTEMVGEIGLKNTEFLPDIVPVLIDVLDDDTPAVIRQVILCGIDLFRSTLEKITIQGLYSSDLDSALESAWEWMVKFKEKVYSIAFQDGRGGAKLLALKFVEAVIHLYTPDPNGSSEPTSHQGKPPEFNVSWLRRGHPVLKYGDLSIEASHSLGLLLDQLRFPTVKSLSNSVIIVLIKSLSAIAIDRPAFYSRILPVLLSLEPSSSVVNGVCVSAAHLALKKAFLTCTKCTHPSAAPWRDRLGGALKEMQSEGKADQVFHAISASNGSILQRAEDYQSVIKEEDAAVNSFDSGHVNLVRKRSGSENGGDLTGDADVPGKRVRTTTEGFKEPKNELDESTANTLDDSPSALPASSKGDEENGPVLQLVAMFGALVAQGEKAVASLEILISSISADLLAEVVMANMRNLPPNCPNAEGNDEQLHDISIFGSHDKAKYPPSFVAGVMSLSSTFPPVASLLDAHQSVSNDLVKSHGEEEISTTGVDSSAMHSGMILSSQNVPSPTDFPSSDTCIPGVENVSTSVPIDIDDDGNLESGIPGLDSFGRNDALSETLAASSLASSDLQIEEEQVTSLDKRSPLNIVPSTSADRSEELSPKAVATDVNSLVSSTATSVVLPTRLVLPKMIAPVVDLADEQKDHLQISCFMRIIDAYKHIATAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYSSHEGHELTLRVLYRLFGEAEAEPDFFSSTTAASVYETFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKIVENMCSPGNGDKVEKESHTLNADRVTQGLSAVWSLVLLRPPIRDTCLKIALQSAVHHLEEVRMKAIRLVANKLYPLSSISRQIEEFAKETLFSVMSDASEATDAEGSVADSQKGPDIEKLTNEPLSLSGNTKDVLDNRQSSTSEGTSPVSVSEAQRGMSLYFALCTKKHSLFREIFVIYKSTSKAAKQAIHRQIPILVRTLGSSSDLLEIISDPPNGSENLLMQVLHTLTDGTIPSKDLIYTVKRLHDTKLKDAEILIPILPFLSKDEVMPVFPHIVNVPLEKFQGALSRVLQGSSQSGPVLTPAEILIAIHGIDPERDGIALKKVTDACNACFEQRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIMGILSRLVKKQIWKYPKLWVGFLKCLQLTKPQSFGVLLQLPPPQLEAALNRIAALKAPLIAHASQPDIQSSLPRSVLVVLGIVSDSQVSSQTQTSQTQTGETSNSDKDTMTEKSKESSTAS 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02509 1335 MobiDBLite consensus disorder prediction 641 658 - -
Car06g02509 1335 SUPERFAMILY ARM repeat 32 1228 IPR016024 -
Car06g02509 1335 PANTHER SYMPLEKIN/PTA1-RELATED 1 1238 - -
Car06g02509 1335 MobiDBLite consensus disorder prediction 1302 1319 - -
Car06g02509 1335 MobiDBLite consensus disorder prediction 937 984 - -
Car06g02509 1335 Pfam Symplekin/PTA1 N-terminal 102 318 IPR032460 -
Car06g02509 1335 MobiDBLite consensus disorder prediction 385 409 - -
Car06g02509 1335 MobiDBLite consensus disorder prediction 957 984 - -
Car06g02509 1335 MobiDBLite consensus disorder prediction 641 661 - -
Car06g02509 1335 MobiDBLite consensus disorder prediction 369 428 - -
Car06g02509 1335 Pfam Symplekin tight junction protein C terminal 1087 1265 IPR022075 -
Car06g02509 1335 Gene3D - 1 344 IPR011989 -
Car06g02509 1335 MobiDBLite consensus disorder prediction 1302 1335 - -
Car06g02509 1335 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02509 Car-Chr6 29124575 29141457 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02509 K06100 - gmx:100779360 2039.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02509 06 29124575 29141457 Car06g02509 06 29124575 29141457 ECH