Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02506 ATGGATAGTGAAAAATGGCCAGAGCCAATTATTAGAGTCCAAGCCTTAGCTCAAAGTGGCATAACTTCAATTCCTCAACGTTTCATCAAACCAAAATTCCAAAGACCAACAAATTTTACTACAACTCAATCTTTTCTTCATGATCATGATGAGAATTCAAACAACAACCTTAATATTCCAATTATTGATTTACAACACTTGAAAGGCGACGACAAGAAGCTTCGAGCGGAAACGCTAGAGCGCGTTTCCGAGGCGTGTCGAGAATGGGGATTTTTCCAAGTTTTGAACCATGGTGTTAGTCATGAGTTGATGAAGTGTGCTAGGAATGTTTGGCGTGAGTTTTTTGAATTACCAATTGAGGTGAAGGAAGAGTATGCTAATTCACCAAGTACTTATGAGGGTTATGGAAGTCGATTGGGAGTTAAAAAGGGTGCCATTTTGGATTGGAGTGATTACTTTTTTCTTCATTACATGCCATGCTCACTTAGGAACCAAACCAAGTGGCCTTCTCTTCCAACTTCTTTAAGGAATGTGATCAATGAATATGGTGATGAAGTTGTTAAGCTAGGAGGAAGGATACTTCAATTATTATCAATTAATCTTGGACTTAATGATGATTTCCTTTTAAATGCATTTGGTGGTGAAAAAGATGTTGGTGGTTGCTTAAGGGTGAATTTTTATCCAAAGTGTCCTCAACCTGATCTCACACTTGGTATCTCTCCTCACTCTGATCCTGGTGGTTTGACCATTCTTCTTCCTGATGATTTTGTATCTGGACTTCAAGTTCATAGAGGAGATGATTGGATCACTGTTAAGCCTCTTCCAAATGCTTTCATCATCAATATTGGTGACCAAATTCAGGTGTTGAGCAATGCAATATACAAGAGCATAGAACATAGAGTGATAGTGAATTCCAACAAAGATAGAGTTTCATTGGCCTTCTTTTATAATCCTAGGAGTGATTTACTGATTGAACCTGCTAAGGAACTTGTCACTAAGGAAACGCCACCACTCTACCCACCAATGACATTTGATGAATATAGACTTTACATTAGGACAAAAGGGCCTTGTGGAAAAGCTCAAGTAGACTCTTTGTTATCCCAAAAATGA 1110 0.3829 MDSEKWPEPIIRVQALAQSGITSIPQRFIKPKFQRPTNFTTTQSFLHDHDENSNNNLNIPIIDLQHLKGDDKKLRAETLERVSEACREWGFFQVLNHGVSHELMKCARNVWREFFELPIEVKEEYANSPSTYEGYGSRLGVKKGAILDWSDYFFLHYMPCSLRNQTKWPSLPTSLRNVINEYGDEVVKLGGRILQLLSINLGLNDDFLLNAFGGEKDVGGCLRVNFYPKCPQPDLTLGISPHSDPGGLTILLPDDFVSGLQVHRGDDWITVKPLPNAFIINIGDQIQVLSNAIYKSIEHRVIVNSNKDRVSLAFFYNPRSDLLIEPAKELVTKETPPLYPPMTFDEYRLYIRTKGPCGKAQVDSLLSQK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02506 369 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 4 363 - -
Car06g02506 369 Pfam 2OG-Fe(II) oxygenase superfamily 221 318 IPR044861 -
Car06g02506 369 Gene3D - 9 353 IPR027443 -
Car06g02506 369 SUPERFAMILY Clavaminate synthase-like 10 351 - -
Car06g02506 369 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 217 318 IPR005123 -
Car06g02506 369 Pfam non-haem dioxygenase in morphine synthesis N-terminal 59 169 IPR026992 -
Car06g02506 369 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE 4 363 - -
Car06g02506 369 PRINTS Isopenicillin N synthase signature 82 99 - -
Car06g02506 369 PRINTS Isopenicillin N synthase signature 278 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02506 Car-Chr6 29024428 29030007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02506 13 365 Glycosyltransferase AT5G59530 33.425 1.95e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02506 - - pvu:PHAVU_010G000300g 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02506 06 29024428 29030007 Car06g02506 06 29024428 29030007 ECH