Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02479 ATGGAAGATATCACTAAAAAATATGAAGTGGTTGAAAGAGATGGCTCATATACAGAAGATGGAACAATAGACATTCACAAAAAACCAGCCAACAAGAAAAAGACAGGAAATTGGAAAGCATGCAGCTTTATTCTCGGAAATGAATGTTGTGAAAGATTGGCTTACTATGGCATGAGTACAAACTTGGTGAACTATCTCCAAGACCATTATGGTCAAGGAAATGCAACTGCTGCAAATACTGTCACAACATGGTCAGGGACATGCTACCTCACACCATTGCTTGGAGCCTTTTTAGCTGATTCTTATTTTGGAAGATACTGGACAATTGCCGGTTTCTCATGTATCTATGTCCTTGGAATGGCACTTTTAACATTTTCAGCAGTTGCACCTGGATTAATACCTTCATGTGATGCTAATGGTTGCAAACCAACATCAGGACAAACTGCAGCATGCTATATAGCACTCTACTTGATTGCTCTCGGAACCGGAGGTATCAAACCGTGTGTTTCATCTTTCGGTGCCGACCAATTCGATGAAAACGATCAGACCGAGAGGAAAAAGAAAAGCTCTTTTTTCAATTGGTTTTACTTCTCGATTAATATCGGTGCACTCATCGCTTCCTCGGTGTTGGTTTGGATACAGATGAATGTGGGATGGGGATGGGGTTTTGGAGTGCCTGGAGTTGCGATGGTCATCGCAATTATATTTTTCTTTATCGGTAGTCAATGGTACCGACTTCAAGTGCCTGGTGGGAGTCCTCTTACAAGGATTTGTCAAGTTACAGTTGCGGCATTTAAGAAACTTGGGCTACAAGTTCCAGATGATAAGTCTCTTCTTTATGAGACTGCTGATGCAGAATCTAACATCAAAGGGAGCCGCAAACTTGAGCACACTAATGAAATGAAGTGCTTAGATAAGGCAGCTGTTGAAACAGAATCTGACAGGAGTAAAGCTGTACCAAATCCATGGAGGCTCTGCACAGTAACACAAGTCGAAGAACTCAAATCGATCATCCGATTACTCCCCGTTTGGGCATCAATGATAGCCTTTGCAACAGTCTACAGTCAAATGGGAACAATGTTTGTGTTACAAGGCAACACTATGGATCAACATATCGGTCCTCACTTCAAAATTCCGTCTGCATCCCTCTCCCTTTTCGATACTCTAAGCGTCATCTTCTGGGCTCCGGTCTATGATCGAGTTATCGTCCCCTTCGCAAGAAAGTTCACTGGCCACGAACACGGATTCACAGAACTTCAAAGAATGGGAATCGGACTGGTCATCTCCATTATATCCATGATAGTGGCAGGCATTCTCGAAGTCGTTCGCCTCGACATAGTCCGTAAAAACAACTACTACGATCTTGAAACCATCCCTTTATCAATCTTCTGGCAAGTGCCTCAGTACTTTCTCATTGGAGCGGCTGAAGTTTTCGCTAATATCGGTCAGATGGAGTTCTTTTACAGTCAAGCGCCGGATGCTATGAGAAGTTTATGCTCCGCACTTTCACTCACAACTAATGCATTGGGAAATTATGTGAGCACATTGCTTGTGATGATTGTCACAAAAGTTACAACAAGAAATGGAAGTCTTGGTTGGATTCCTGATAACATGAATAGGGGACATCTTGATTACTTCTATTGGCTTTTGACAATACTTAGTGTCCTCAACTTCATTGTGTATCTTTGGATTGCTAAGAAGTATTCATACAAAAAAGTGACAAGAAGTACTAATTGA 1737 0.4185 MEDITKKYEVVERDGSYTEDGTIDIHKKPANKKKTGNWKACSFILGNECCERLAYYGMSTNLVNYLQDHYGQGNATAANTVTTWSGTCYLTPLLGAFLADSYFGRYWTIAGFSCIYVLGMALLTFSAVAPGLIPSCDANGCKPTSGQTAACYIALYLIALGTGGIKPCVSSFGADQFDENDQTERKKKSSFFNWFYFSINIGALIASSVLVWIQMNVGWGWGFGVPGVAMVIAIIFFFIGSQWYRLQVPGGSPLTRICQVTVAAFKKLGLQVPDDKSLLYETADAESNIKGSRKLEHTNEMKCLDKAAVETESDRSKAVPNPWRLCTVTQVEELKSIIRLLPVWASMIAFATVYSQMGTMFVLQGNTMDQHIGPHFKIPSASLSLFDTLSVIFWAPVYDRVIVPFARKFTGHEHGFTELQRMGIGLVISIISMIVAGILEVVRLDIVRKNNYYDLETIPLSIFWQVPQYFLIGAAEVFANIGQMEFFYSQAPDAMRSLCSALSLTTNALGNYVSTLLVMIVTKVTTRNGSLGWIPDNMNRGHLDYFYWLLTILSVLNFIVYLWIAKKYSYKKVTRSTN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02479 578 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 22 574 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car06g02479 578 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 2. 192 204 IPR018456 GO:0006857|GO:0016020|GO:0022857
Car06g02479 578 Pfam POT family 106 534 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car06g02479 578 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 95 119 IPR018456 GO:0006857|GO:0016020|GO:0022857
Car06g02479 578 SUPERFAMILY MFS general substrate transporter 27 568 IPR036259 -
Car06g02479 578 Gene3D MFS general substrate transporter like domains 9 576 IPR036259 -
Car06g02479 578 PANTHER PROTEIN NRT1/ PTR FAMILY 8.1 22 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02479 Car-Chr6 27944874 27948727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02479 11 572 Organic Solute Cotransporters AT3G54140 73.936 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02479 K14638 - gmx:100779289 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02479 06 27944874 27948727 Car06g02479 06 27944874 27948727 ECH
Car03g01191 03 55531539 55539769 Car06g02479 06 27944874 27948727 PCT