Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02476 ATGAAACCATCTTCTTCCACGAATCTTCTTCTTTTGCTCTTCCTTGTTCTCTCATCCTTCGTTTTCTCCGAGGATTCCAAGAAGAATGTTTTCCGGGAACGTGAAGCCTCCGATGATGCCTTAGGATACCCCGAAATAGATGAGGATGCTTTGGTGAATTCAAAATGTCCTATGAATTTGGAGTTAAGATGGCAAACGGAAGTTAGTTCTAGCGTCTATGCAAACCCCTTGATTGCTGATATTAACAGTGATGGAAAGCTTGACATAGTGGTTCCTTCTTTTGTTCACTACCTTGAAGTTCTAGAAGGTACCGATGGGGACAAAATGCCAGGCTGGCCTGCTTTCCATCAATCAACTGTGCATTCTAGTCCTCTTCTATACGACATAGACAAAGATGGGGTGAGAGAAATAGCGTTGGCAACCTACAATGGTGAAGTGCTTTTCTTCAGAGTTTCCGGCTATATGATGTCAGAAAAGCTTGTGGTCCCACGTAGGAAAGTGCTTAAAAATTGGTACGTGGGTTTGAATAATGATCCAGTGGACCGTACCCATCCAGATGTTCATGATGATCAACTTGTTCAAGAAGCTACTATTGCAAATTCTATGTCCCAAATGAATGGAAGCAGACATGAACTCAATTCTTCAGCTGCCACATCAACAGAAAGTCACCCTGACACACAAAGTCTGTCCAATCCAGAGCCTGAAAAGAAAATAAATGGAAGCCAATCAGAGGAGAATATTAAGATGCCAACAACTGCGGATAATTCCTCTGTGAGTGCTGGTTCTATGGAGACTGTTAATGCAGATAACAAAACCAGCACCGGGAGGCGTCTGCTGGAAGATAACAACTTAAAAGGAGCTGAACAAGGTGGTTCTGAATCCAAAGATAAGGAAGAGATTCATGTTGCAACTGTGGAAAATGATGAAGGCTTGGAAGCAGATGCTGATTCGTCTTTTGAGATATTTCGCAATAGCGATGAGCTGGCTGATGAGTACAGCTatgattatgatgattatgttgatgaATCACTGTGGGGTGATGAAGAATGGACTGAAGTGAAACATGATAAATTAGAGGATTACGTGAATGTTGACTCACATATCTTGTGCACTCCTGTCATTGCAGATATTGACAACGATGGTGTATCGGAAATGGTTGTTGCTGTCTCTTATTTCTTTGAACATGAGTATTATGACAAGCAGGAGCATATGAAAGAACTGGGTGATATTGATATTGGGAAATATGTTGCTGGTGGTATTGTTGTTTTTAATCTGGATACAAAACAAGTTAAGTGGACTGTAGAACTTGATCTGAGTACAGATACAGCAAACTTCCGAGGGTACATATATTCTTCTCCAACTGTTGTAGATTTGGATGGTGATGGGTATCTGGACATTCTTGTTGGAACTTCTTATGGCCTATTTTACGTGTTAGATCATCATGGTAAAATTAGAGAAAAGTTCCCTCTTGAAATGGCCGAGATTCAAGGAGCTGTTGTTGCAGCTGATGTTAATGATGATGGAAAAATTGAGCTAGTTACTGCTGATACACATGGAAATGTTGTTGTATGGACACCCAAAGGAGATTTGATATGGGAAAAGCATCTGAAGAGTCTTATTCCACATGCTCCAACTGTTGGCGATATTGACGGGGATGGCCATACGGAGCTTGTTGTGCCAACAATATCTGGGAAGATTCATGTTCTCGATGGCAGGGATGGATCATCTATTGGACGGTATCCGTTCATAACTCATGGAAGAGTGATGAATCAAGTTCTTCTAGTTGATTTAAGTAAACACAAGGAAAAAAAGAAGGGATTGACTATTGTTACCACTTCATTTGATGGTTATTTGTACCTCATTGATGGACCTACAGGCTGTGCTGATGTTGTTGATATTGGTGAAACTTCATATAGCATGGTATTGGCAGACAATGTGGATGGTGGGGATGATCTTGATTTGATTGTCTCAACAATGAATGGCAATGTCTTCTGCTTCTCAACTCCCTCTCCTCACCATCCCCTCAAGGCATGGAGATTGCCTAGCCAAGGAAGAAATAATGTTGCAAATCGGTACGGTCGTGAAGGCATCTACGTTACTCATCCTTCTAGGGCATTCCGTGATGAGGAAGGCAAGAGCTTTTGGGTGGAAATTGAGATTGTAGATAATTACAGATACCCATCTGGTCATCAAGGACCATACCATGTCACTACATCCTTGTTTGTCCCTGGTAATTACCAAGGAGAAAGAACAATAAAACAGAACCAGACCTATAACCAACCTGGTAAACATCGAATTAAGCTACCAACTGTGGGAGTAAGGACTACAGGAACAGTTTTGGTTGAGATGGTTGACAAAAATGGGCTATACTTCTCTGATGAATTCTCCCTGACATTCCATATGCACTACTATAAATTGTTGAAGTGGCTTCTTGTTCTTCCGATGCTTGGGATGTTTGGCGTGCTTGTCATCCTTCGCCCACAAGGCTCAGTGCCATTGCCATCGTTTTCGAGGAACAGTGATTAG 2526 0.4133 MKPSSSTNLLLLLFLVLSSFVFSEDSKKNVFREREASDDALGYPEIDEDALVNSKCPMNLELRWQTEVSSSVYANPLIADINSDGKLDIVVPSFVHYLEVLEGTDGDKMPGWPAFHQSTVHSSPLLYDIDKDGVREIALATYNGEVLFFRVSGYMMSEKLVVPRRKVLKNWYVGLNNDPVDRTHPDVHDDQLVQEATIANSMSQMNGSRHELNSSAATSTESHPDTQSLSNPEPEKKINGSQSEENIKMPTTADNSSVSAGSMETVNADNKTSTGRRLLEDNNLKGAEQGGSESKDKEEIHVATVENDEGLEADADSSFEIFRNSDELADEYSYDYDDYVDESLWGDEEWTEVKHDKLEDYVNVDSHILCTPVIADIDNDGVSEMVVAVSYFFEHEYYDKQEHMKELGDIDIGKYVAGGIVVFNLDTKQVKWTVELDLSTDTANFRGYIYSSPTVVDLDGDGYLDILVGTSYGLFYVLDHHGKIREKFPLEMAEIQGAVVAADVNDDGKIELVTADTHGNVVVWTPKGDLIWEKHLKSLIPHAPTVGDIDGDGHTELVVPTISGKIHVLDGRDGSSIGRYPFITHGRVMNQVLLVDLSKHKEKKKGLTIVTTSFDGYLYLIDGPTGCADVVDIGETSYSMVLADNVDGGDDLDLIVSTMNGNVFCFSTPSPHHPLKAWRLPSQGRNNVANRYGREGIYVTHPSRAFRDEEGKSFWVEIEIVDNYRYPSGHQGPYHVTTSLFVPGNYQGERTIKQNQTYNQPGKHRIKLPTVGVRTTGTVLVEMVDKNGLYFSDEFSLTFHMHYYKLLKWLLVLPMLGMFGVLVILRPQGSVPLPSFSRNSD 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02476 841 Pfam FG-GAP repeat 451 473 IPR013517 -
Car06g02476 841 PANTHER PROTEIN DEFECTIVE IN EXINE FORMATION 1 241 840 - -
Car06g02476 841 PANTHER PROTEIN DEFECTIVE IN EXINE FORMATION 1 7 232 - -
Car06g02476 841 SUPERFAMILY Integrin alpha N-terminal domain 57 590 IPR028994 -
Car06g02476 841 MobiDBLite consensus disorder prediction 203 299 - -
Car06g02476 841 Gene3D - 279 673 IPR015943 GO:0005515
Car06g02476 841 Pfam FG-GAP-like repeat 503 559 IPR013517 -
Car06g02476 841 MobiDBLite consensus disorder prediction 203 273 - -
Car06g02476 841 PANTHER - 7 232 IPR045232 -
Car06g02476 841 PANTHER - 241 840 IPR045232 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02476 - - gmx:100500591 1475.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02476 06 27898300 27907075 Car06g02476 06 27898300 27907075 ECH