Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02449 ATGAGGACAGAATGGAAAACACAAACTTGTAATAGGAATTTATGTGATAGGAATCTGAGAAAGGATCAACTTGGTGGGGTCATATTTGGATGCACTAAGAATACAATGAAAGAATGTCTATCTAAACAACTCTTTGGACTACCGACACGACACTTTTCCTATGTGCAAAATATTGATCCCGGGTTGCCTTTGTTTCTATTCAACTATAGTGATAGGAAGCTTCATGGAATTTTTGAGGCATCATCTAAAGGAAAAATGTACATGGACCCTTATGCATGGATTGATGACGATTTTTCAGATAAAACACAATATCCTGCACAGGTGAAAGTTCGTGTTCGAATTCAGTGTCATCCATTGTCCGAAGATAAATTTGGGCATGCAATTGCAAAGAACTATTATTCTGATAACCATTTTCGATTTGAACTCGACCATAGACAAACAAGCAATCTAATGTATTTGCTCGCGTCTATGGCAATAGCTCCTGGTACGCCCATACCGCGATGTAATACAAAGTGGAGAACCCTAAATCGATCTCTTTCATCGCGTGAAATGAGAGATGGAGACATCAAACAATTGTATAATCGCCCGATTAAGAAGCAGATAGATGAAGATGACAAAAATCTTATTTATAAGAAACTATTGAAATTAGCTCGTGATAAGGAATGTGGAGAACTATCTTTACTACACCATGCACACAACGTAGATGACGCTCCTTATATAGAGATGCCAACATATTTAGAACAGATGGGAGCGAGTTCATGTGCTTCAATTGAGAATCAATACACCGTATTTCAGTTTGGGCAAGGAGTTGAAGAACTCGGAGCTTTCAAACAAGCACAATTGCAGGAGAATTTTTATCTAGAAGAAAAGTTGATGAAGACATCATTGGAAATTCAACATGTGAAACATCATTGTACAATATTTGAATGTACAAATGTTGAGCAAACAACTATGCAATCAACTATTGAGTTGCATTTGAACTCTAAACGATCATCACTTTCAAAAGGAAGTTTTGAAGGTGCTACTACCAATGGATTTGAATGCTTAACAAATGTTGAGATGCTTGATTTAGATCGTGGAAGATGGATGTCTACTCATTCAATTTTAGATAAGAGAATTATTCGTGCTGCAATGGAACTCAATCTTTCACTTCATGATGGCAAGGATGGATACAATGGACTTGAATATTTAAAGTATACTATTGGTAGCTTTGATGAATGCACAATGATTCCATATATTGAACTCTTTAATCCATGTTTTGATGCAAAGATGCAAATAACGAATAATATGGAAGAATTTGCATATGAATATACGGGACCAAAGGAATCAAAAAACCTCACACCGTCGCACTCGCCGCACTCGCGTATTCTTAGCCCACGACTGTCACACCTCACCGTCGCATCTCAAATCACCACCGTCACATCTCAAGTCACCACTGTCACACCTCGCCACCGTATCTCAACCATAGTCATCGTAACCTCGTCGCCGTCCCACCACCGTCACACCTTGCGGCCATCGAATCTTAAGCTATTTACGTTGCACCTCAACTTCGTCATCGTAACCTCGTCGCCTTCTGAGAGTGGTGGCGGTGGAAACAAGAGAAGAAGAAGAGTGGTGTTTCCGGCAAAAGGGAACTGA 1638 0.3932 MRTEWKTQTCNRNLCDRNLRKDQLGGVIFGCTKNTMKECLSKQLFGLPTRHFSYVQNIDPGLPLFLFNYSDRKLHGIFEASSKGKMYMDPYAWIDDDFSDKTQYPAQVKVRVRIQCHPLSEDKFGHAIAKNYYSDNHFRFELDHRQTSNLMYLLASMAIAPGTPIPRCNTKWRTLNRSLSSREMRDGDIKQLYNRPIKKQIDEDDKNLIYKKLLKLARDKECGELSLLHHAHNVDDAPYIEMPTYLEQMGASSCASIENQYTVFQFGQGVEELGAFKQAQLQENFYLEEKLMKTSLEIQHVKHHCTIFECTNVEQTTMQSTIELHLNSKRSSLSKGSFEGATTNGFECLTNVEMLDLDRGRWMSTHSILDKRIIRAAMELNLSLHDGKDGYNGLEYLKYTIGSFDECTMIPYIELFNPCFDAKMQITNNMEEFAYEYTGPKESKNLTPSHSPHSRILSPRLSHLTVASQITTVTSQVTTVTPRHRISTIVIVTSSPSHHRHTLRPSNLKLFTLHLNFVIVTSSPSESGGGGNKRRRRVVFPAKGN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02449 545 PANTHER INFLUENZA VIRUS NS1A-BINDING PROTEIN 338 398 - -
Car06g02449 545 SMART dcd 22 156 IPR013989 -
Car06g02449 545 Pfam Development and cell death domain 25 153 IPR013989 -
Car06g02449 545 PANTHER INFLUENZA VIRUS NS1A-BINDING PROTEIN 7 342 - -
Car06g02449 545 ProSiteProfiles DCD domain profile. 22 156 IPR013989 -
Car06g02449 545 PANTHER - 338 398 IPR044832 GO:0034976
Car06g02449 545 PANTHER - 7 342 IPR044832 GO:0034976
Car06g02449 545 MobiDBLite consensus disorder prediction 522 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02449 Car-Chr6 27247422 27254657 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02449 - - var:108346607 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02449 06 27247422 27254657 Car06g02449 06 27247422 27254657 ECH
Car03g01337 03 58328451 58340124 Car06g02449 06 27247422 27254657 PCT