Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02440 ATGGAACCTGCCGTAGGGAAGCATAGCTTTCTTCGAAACGTTCTGGTGCGGTTACTTCTCTTCGGCGTTTTCATCGTCATTATTCGTTTTGCTTACGTCATCACTATCACCGGTGAATCATGCAACGTCGGCGATTTTTGTTTCTTCTCTTCACCCGAGGCAATTAACGTCGCCGTCACCGGATCCAGTGCCGGCGCTCTTGCCGTTCGCTCCTCCGCCGAAGTAACTACGCCGGAGCATCACGCTAGCAAAGACTGGATCAACGGCGTCCGTTTCTACTCTTCCGTTTTCCAGGATTTTATCGCCGGTGGTTACCTTTCGCCGGCGGCGAAATCTCTCTGTGTTGATACTCCGATAGGGATGGAGGTTTTCGCTTTGAAGGAGATCGGCGTTGTGGACGCTGTTGGAATTTCGAAGAAGGCGTTGAAGCCGTTGGTGAAATCCGGCGAAGGACACCAGATTCCGTTTGGTAATAACACGTTTGACTTTGTGTTCTCCGGTAACGGCGGTCTTGAGAGATCGGTGAAACCGTCCGAATTTGTATCGGAAATCGCGAGGACGCTGAAACCCGAAGGGTTTGCAGCTTTCCATGTAAAGGCTAGAGATTCTTACAGTTTCAATTCATTTGTTGATTTGTTCAAATTTTGTTGCAAAGTAGTTAAATTCAACGACATTCAAGGTTTCGACGATTCATTGATGCCTGAGATTAGAGAAATCATCGTGAAGAAAATCGGTTATAGAAATATTGATTCTGATTCTGTTACTGATTTGAATAGGGATAAGAAATGTTCTGTTGCAGGGTATAAAAGAGAATCGGTGAAAAATGCTGAACCATTGATTGAAGAGGAACCATTGAAACCATGGATAACTCTAAAGAAAAATGTGAAGAACATAAAGTATCTTTCATCAATGGTTGATATAAGCTTTAAGAATAGGTATGTTTATGTTGATGTTGGAGCTAGAAGCTATGGTTCAAGTATTGGAAGTTGGTTTAAGAAACAATATCCAAAACAGAACAAAACATTTGATGTTTATGCAATTGAAGCTGATAAAACTTTTCATCAAGAGTATGTGATGAAAAAAGGGGTAACTTTGTTACCTTATGCTGCATGGGTTAGGAATGAAAGTTTAGTTTTTGAAATTAACAACGATCCAGGTGATAAGAATAAAGAGAAAATAGGGAGAGGTATGGGAAGGATTCGATCGTTGGAGTCTCAGGGTGGTGATGGTGGCGGCGGCGTTGAGAAGATACAAGGGTTTGATTTTGCGGATTGGTTGAAGAACACAGTTACGATGAACGATTTTGTTGTTATGAAAATGGACGTTGAGGGTACTGAGTTTGATTTGATTCCGAGGTTGTTTGAAACCGGTGCTATTTGTCTGGTTGATGAAATTTTTCTTGAGTGTCATTACAATAGATGGCAGAGGTGTTGTCCTGGAGAAAGAAGTCCCAAGTATGAGAAAACATATGATCAATGTTTGCAGCTTTTCAATTCTCTTAGACAAAGTGGTGTTCTTGTTCATCAATGGTTTTAG 1536 0.4167 MEPAVGKHSFLRNVLVRLLLFGVFIVIIRFAYVITITGESCNVGDFCFFSSPEAINVAVTGSSAGALAVRSSAEVTTPEHHASKDWINGVRFYSSVFQDFIAGGYLSPAAKSLCVDTPIGMEVFALKEIGVVDAVGISKKALKPLVKSGEGHQIPFGNNTFDFVFSGNGGLERSVKPSEFVSEIARTLKPEGFAAFHVKARDSYSFNSFVDLFKFCCKVVKFNDIQGFDDSLMPEIREIIVKKIGYRNIDSDSVTDLNRDKKCSVAGYKRESVKNAEPLIEEEPLKPWITLKKNVKNIKYLSSMVDISFKNRYVYVDVGARSYGSSIGSWFKKQYPKQNKTFDVYAIEADKTFHQEYVMKKGVTLLPYAAWVRNESLVFEINNDPGDKNKEKIGRGMGRIRSLESQGGDGGGGVEKIQGFDFADWLKNTVTMNDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGERSPKYEKTYDQCLQLFNSLRQSGVLVHQWF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02440 511 Gene3D Vaccinia Virus protein VP39 297 475 IPR029063 -
Car06g02440 511 Pfam Methyltransferase FkbM domain 317 477 IPR006342 -
Car06g02440 511 PANTHER METHYLTRANSFERASE 1 511 - -
Car06g02440 511 Pfam Methyltransferase domain 147 196 IPR013216 GO:0008168
Car06g02440 511 PANTHER METHYLTRANSFERASE 1 511 - -
Car06g02440 511 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 149 207 IPR029063 -
Car06g02440 511 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 300 454 IPR029063 -
Car06g02440 511 Gene3D Vaccinia Virus protein VP39 133 276 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02440 Car-Chr6 27009206 27011625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02440 - - gmx:121174389 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02440 06 27009206 27011625 Car06g02440 06 27009206 27011625 ECH
Car03g01345 03 58454566 58456991 Car06g02440 06 27009206 27011625 PCT