Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02430 ATGGTTAAAACACTAGAACAAGAACAAGAAAATTGCAAATCCAAACTATTCAATTTCAAAGGAATGTTTGAGAATACAGGGAGACATACAAAAAGTTTAAGCATTGAAAGTGCCAGCACATTAGATCCTATAGAAGATGATCCTTCTTCATCAAGAAGTCAAGGATCAAAACCTCTTCATGATTCAGAAAAAGTACTTCCTAACAAATCAAGAACAATCAAGGAGGAAATTGCAGCAAAAGAAGCCAAAGACAAGCTAATACAAGAACTGGAACAGATGAAGGAGAGATTTGCTAAACTATTATTGGGAGAGGATATGTCTGGTGGAGGAAAAGGTGTTTCTTCAGCATTAGCATTATCAAATGCATTAACAAATCTTGCTGCTGCTGTTTTTGGCGAACAAAAGCGGTTAGAGCCAATGGCGCCCGAAAGGAAGGCAAGGTGGCGAAAAGAAATCGATTGGCTTCTTTCCGTCACCGAATACGTAGTTGAAATGGTTCCTACACAACAGAAATCTAAAGATGGTTCAATCATGGAGATTATGACAACGAGGCAACGAACCGATCTTCACATGAATATCCCTGCCTTGAGAAAGCTTGATACAATGCTTATTGATTGTCTAGACAATTTCAAAGACCAAACTGAATTTTATTATGTATCAAAAGATGCTGATGATCAAAATAAAGATAGTTCAAAATCAAAAAATGATGATAAATGGTGGTTACCAACACCTAAGGTACCTGTAGATGGTTTATCTGAGGCAGCAAGAAGGTTTCTTCAATATCAAAAAGATTGTGTAAATCAAGTACTTAAAGCAGCTATGGCTATAAATGCTCAAACTCTATCAGAAATGGAAATCCCTGAAAGCTATATTGAATCCTTACCTAAGAATGGAAGAGCAAGTCTAGGGGACTTGATCTACCGGAGTATTACCGACGAATTTTTCGATCCGGATCAGTTCCTAGGGACAATCGACATGTCGTCGGAACACAAAATCCTTGATCTGAAGAATAGAATTGAGGCATCAATAGTTATTTGGAAGAGGAAGATGAACCAAAAAGATACAAAATCATCATGGGGTTCTGCTGTTAGTATGGAGAAAAGAGAACTCTTTGAAGAGAGAGCAGAAACCATCTTAATTCTCTTGAAGCATAGGTTTCCAGGACTTCCACAATCTTCATTGGATATAAGCAAAATCCAATTCAACAAGGATGTAGGACAAGCTGTTCTTGAAAGTTATTCAAGAATATTGGAAAGTTTAGCCTTCACAGTACTATCAAGAATAGAAGATGTACTCCATGCAGATGGCCAAACTCAAAATCCATCACAAGGAAGAAAAAGCAATGCAAGGAATCCAATTCCAAAGCCAGACAAATGTCCAACACAAAGAGAAGAGGTAGAAAAGAGTGGCGGCGCAGAAACACCGTTGTCGTCGATGACACTATCTGATTTCATGGGTTGGAGTAATGACCAAGGTGAATCAGATAAAAAGGATCCTCTTGCTGTTTCAGATGAATTGGAAAAAGATATTGATAATGGTGGAAAGCTTCAAAAACTTCCAATTATAAATACTGATCATAAGAAAATGTCTTACCTTGAGACAATGGGAGTTCTCAGAGGGAGAGGAGAGAAAGAAGAAATGTGCTAA 1647 0.3764 MVKTLEQEQENCKSKLFNFKGMFENTGRHTKSLSIESASTLDPIEDDPSSSRSQGSKPLHDSEKVLPNKSRTIKEEIAAKEAKDKLIQELEQMKERFAKLLLGEDMSGGGKGVSSALALSNALTNLAAAVFGEQKRLEPMAPERKARWRKEIDWLLSVTEYVVEMVPTQQKSKDGSIMEIMTTRQRTDLHMNIPALRKLDTMLIDCLDNFKDQTEFYYVSKDADDQNKDSSKSKNDDKWWLPTPKVPVDGLSEAARRFLQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKNGRASLGDLIYRSITDEFFDPDQFLGTIDMSSEHKILDLKNRIEASIVIWKRKMNQKDTKSSWGSAVSMEKRELFEERAETILILLKHRFPGLPQSSLDISKIQFNKDVGQAVLESYSRILESLAFTVLSRIEDVLHADGQTQNPSQGRKSNARNPIPKPDKCPTQREEVEKSGGAETPLSSMTLSDFMGWSNDQGESDKKDPLAVSDELEKDIDNGGKLQKLPIINTDHKKMSYLETMGVLRGRGEKEEMC 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02430 548 Coils Coil 73 103 - -
Car06g02430 548 Gene3D PRONE domain, subdomain 2 285 401 - -
Car06g02430 548 MobiDBLite consensus disorder prediction 435 449 - -
Car06g02430 548 MobiDBLite consensus disorder prediction 490 504 - -
Car06g02430 548 MobiDBLite consensus disorder prediction 435 504 - -
Car06g02430 548 MobiDBLite consensus disorder prediction 30 70 - -
Car06g02430 548 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 88 540 - -
Car06g02430 548 MobiDBLite consensus disorder prediction 473 489 - -
Car06g02430 548 MobiDBLite consensus disorder prediction 30 56 - -
Car06g02430 548 Gene3D PRONE domain, subdomain 1 94 435 - -
Car06g02430 548 ProSiteProfiles PRONE domain profile. 80 445 IPR005512 GO:0005085
Car06g02430 548 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 89 439 IPR005512 GO:0005085
Car06g02430 548 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 88 540 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02430 Car-Chr6 26828300 26832534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02430 - - gmx:100812078 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02430 06 26828300 26832534 Car06g02430 06 26828300 26832534 ECH
Car03g01196 03 55653579 55656825 Car06g02430 06 26828300 26832534 PCT