Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02429 ATGGCTTCCATATCTCTTCTCCTCGTAGCTCAAGTAATGCCATACTTAGAACAAGAACTCAACAAACGCTACAACCTTCTCCGCGTATGGGACTTCCCCCAAAAATCTCACCTCTTATCCCAACACGGCGCGTCGATCCGTGCGGTGGTCGGAAACTCAAATGCCGGCGCCGATTCCGAACTCATCGATGCACTACCGAAATTGGAGATTGTTTCGAGCTTCAGCGTTGGGGTTGATAAGATTGATCTTAATAAGTGTAAGGAGAAAGGGATTCGTGTTACGAATACACCTGATGTTTTGACTGATGACGTGGCTGATTTGGCTATTGGTTTGATTCTTACGCTTCTTAGGAGGATTTGTGAGTGTGATCGGTATGTTAGAAGTGGGAATTGGAAGTATGGTGACTATAAGTTGACTACTAAGTTCTCTGGTAAAACCGTTGGCATTATTGGGCTGGGAAGGATTGGGGCAGCAATTGCTAAGAGAGCTGAAGGTTTTAATTGTTCAATATGCTACTATTCTAGAACTCAAAAGCAGGAATCAAAATACAAGTTCTATCCAAGTGTTGTTGAGTTAGCATCCAACTGCGATATACTAGTTGTTGCATGTCCTCTTACCGAGGAAACCCATCACATCATCAACCGGGAGGTCATTAATGCACTTGGTCCGAAGGGTTTTCTAATTAACATCGGCCGAGGTAAGCATGTTGATGAGCCAGAGCTGGTCTCTGCATTGGTTGAAGGTCGTTTGGGTGGAGCCGGACTGGATGTGTTTGAAAACGAGCCTCATGTTCCTGAAGAGCTATTTGGGCTGGACAATGTTGTCTTGTTGCCGCATGTTGGAAGCGGAACAGTAGAAACTCGAACTGCCATGGCTGATCTTGTTCTTGGAAACCTGGAGGCTCATTTCCTTGGAAACCCACTGTTAACTCCCTTGGTTTAA 942 0.4522 MASISLLLVAQVMPYLEQELNKRYNLLRVWDFPQKSHLLSQHGASIRAVVGNSNAGADSELIDALPKLEIVSSFSVGVDKIDLNKCKEKGIRVTNTPDVLTDDVADLAIGLILTLLRRICECDRYVRSGNWKYGDYKLTTKFSGKTVGIIGLGRIGAAIAKRAEGFNCSICYYSRTQKQESKYKFYPSVVELASNCDILVVACPLTEETHHIINREVINALGPKGFLINIGRGKHVDEPELVSALVEGRLGGAGLDVFENEPHVPEELFGLDNVVLLPHVGSGTVETRTAMADLVLGNLEAHFLGNPLLTPLV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02429 313 CDD HPPR 4 303 - -
Car06g02429 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 IPR006140 GO:0051287
Car06g02429 313 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 IPR029752 -
Car06g02429 313 Gene3D - 17 307 - -
Car06g02429 313 Gene3D - 101 284 - -
Car06g02429 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 282 IPR036291 -
Car06g02429 313 PANTHER D-GLYCERATE DEHYDROGENASE/HYDROXYPYRUVATE REDUCTASE 1 313 - -
Car06g02429 313 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 11 309 IPR006139 GO:0016616|GO:0051287
Car06g02429 313 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 1 313 - -
Car06g02429 313 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 6 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02429 Car-Chr6 26820591 26824896 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02429 - K18606 gmx:100779623 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02429 06 26820591 26824896 Car06g02429 06 26820591 26824896 ECH