Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02427 ATGGCTTCTCGCCGCCGCATGTTGTTAAAAGTTATAATCCTCGGTGATAGTGGGGTTGGTAAAACATCATTGATGAATCAGTATGTGAATCGTAAGTTTAGTAATCAGTACAAGGCTACCATTGGTGCCGATTTCCTCACCAAGGAAGTTCAATTTGAAGACAGGTTGTTCACATTGCAGATTTGGGATACTGCTGGNNNNNNNNNNNNNNNNNNNNNAGCGGTTTCAAAGTCTTGGTGTGGCTTTCTACCGAGAACATTAAGAAACTCTTGCATGTTGTTTGATTTTCAGGCTAGTCCATCTGACCCTGAAAACTTTCCTTTTGTTGTCTTGGGAAACAAAATCGATGTTGATGGTGGAAATAGCAGAGTTATTTCTGAGAAGAAAGCAAAGGCATGGTGTGCTTCAAAGGGAAACATACCATACTTTGAGACATCTGCAAAAGAAGGATTTAATGTTGAAGCTGCTTTCCAGTGTATAGCAAAAAATGCACTCAAGAATGAACCTGAAGAAGAAATGTATCTGCCTGACACAATCGATGTCGGAAGTGGTGGCCGACAACAGAGATCGACTGGCTGTGAATGTTGA 588 0.3997 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAXXXXXXXXAVSKSWCGFLPRTLRNSCMLFDFQASPSDPENFPFVVLGNKIDVDGGNSRVISEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEEEMYLPDTIDVGSGGRQQRSTGCEC 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02427 195 PRINTS Transforming protein P21 ras signature 142 164 - -
Car06g02427 195 PRINTS Transforming protein P21 ras signature 104 117 - -
Car06g02427 195 PRINTS Transforming protein P21 ras signature 9 30 - -
Car06g02427 195 PRINTS Transforming protein P21 ras signature 32 48 - -
Car06g02427 195 Pfam Ras family 10 65 IPR001806 GO:0003924|GO:0005525
Car06g02427 195 Pfam Ras family 103 165 IPR001806 GO:0003924|GO:0005525
Car06g02427 195 SMART rho_sub_3 11 167 IPR001806 GO:0003924|GO:0005525
Car06g02427 195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 174 IPR027417 -
Car06g02427 195 Gene3D - 81 175 IPR027417 -
Car06g02427 195 Gene3D - 1 80 IPR027417 -
Car06g02427 195 PANTHER RAS-RELATED PROTEIN RAB7 1 195 - -
Car06g02427 195 ProSiteProfiles small GTPase Rab1 family profile. 4 195 - -
Car06g02427 195 SMART ras_sub_4 6 167 - -
Car06g02427 195 PANTHER RAB FAMILY 1 195 - -
Car06g02427 195 SMART rab_sub_5 9 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02427 Car-Chr6 26796064 26801228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02427 K07897 - gmx:100305824 316.62