Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02426 ATGAGTATGCCGAAGCCTAATCAGGTTGCAGTTAGAGACCTCGTTGAGGAAGCTAAGAAACGAATTGTTATTCTCATCGTTTGTGTCGTTGGACTCTCCTATCTCATGTCATTGACAAGCTCCTCAGTTTGGGTCAACTTGCCTACTGCAGCCTCCTTAATTATTGTTTTCCGCTATTTATCACTGGATTATGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAAGCAGGCTCCACCAGTATTCAGTCTTCAAAGTTGCCTATCGAAAATCCTAAAGCAGTTGCAAAGTTTGAGTGGCGAGCAAAAGTGAATTCTCCTGTTGTTGAGGATGCAATTGATCACTTCACCAGGCATCTGATTTCTGAGTGGGTAACAGATCTTTGGTACTCTCGCTTAACACCGGACGAAGAGGGTCCTGAGGAGTTGGTGCAAATAATTAATGGTGTGCTTGGTGAAATTTCAGGACGCATGAGAAATATAAATCTGATTGACTTTTTGATAAGGGATCTTGTTAATCTCATTTGCACTCACTTGGAGCTGTTTCGTGCTGCTCACTCAAAGATTGAAAAACAACACACAGGTTCATTAACAATTGAAAGTCGAGATTTGGAACTAAAAATTGTGTTGGCTGCAGAAGACAAATTGCATCCTGCTTTATTCTCTTCTGAAGCTGAGCACAAGGTTTTGCAGCATCTGATGAATGGTCTTATGTCTGTCACTTTCAAGTCTGAGGATTTGCAGTGTTCTTTCTTTCGATATACTGTCAGGGAGCTTCTTGCATGTGCTGTAATGCGACCTGTCCTAAATTTAGCCAATCCAAGATTTATTAATGAACGAATTGAATCTGTGGTAATTAATAAAACCAAGGTTAACAAGGGTGTTGGTGCAGCAAAAGGGGTATCCCACACTAAAGCAGATGAGTCACAAACTTCATCTGACCATTTTTCCAAGTATTTAGATCCTTCCGTTACTGGTGTTGAGCTTATGCAGCTAAGCAATGGTCAATCCAGAAATGCAGAGCCATCTGCAGAAAGAAATGCTCGTGATAACATTTCTAGAGACCCATTGCTTTCAATTGATGCTCGATCTTCTCGTTCATGGAACTCATTGCCTGAAAACTCCCAAATTAATGGTGACCAAGGTATTCAACGAAATCGCTCAGGAGGAGAGTGGGGAGATATTTTAGATGTCGTTTCTCGAAGAAAGACCCAAACTCTTGCTCCAGAACATTTTGAGAATGTGTGGGCAAAGGGCAAAAATTACCAGAAAAGGGATGGAGAGAACCAGTCAAATGAGCAAGTCCCACAACATCCCCCAAAAGGGAAATCAGCCAAGGTAGATCATATGAAGGCAATATCTGGACCCAAAGAAAAAGATACTAGATCGAAGCTTAATCCCTCTAAGGGAGGCCACATTAATTCTGGATACAGCAGTCAATTCACTGTTGAAGATGCATCCTTTCATGGAGACAAGAACGGATCAACTTGTTCTTCAGTTACCTCATATAAAGGTGATGAGCACAACCACAGTAGTATGCAGATCAGTGAATCAGAGAGCAATACTTCTTATACTTCTGAAGATGATGAAACTAGTGCTGTTACTGGTCTTGATTCCCCTGGAACTAAGGTTTGGGATGGGAGAAGTAATAGAAAGCAAGCTGTTTCTTATGTTCATCACCCACTTGAAAATTTTGATAACCACAGTACAAAGAAGAAGAATAAGAGCCGTTCTCGCTATCCAAGATTATTCAGAACCCAGTCTGGCAGTAAAAGGTCTAGACCAAGCGATCACAAAACACATATGTGGCAGGAAGTTGAAAGGTCAAGCTTTTTATCTGGTGATGGTCAAGATATACTTAGCACATCAAAATCACTTGTGAACTCGGAGGATTCCTCTGATGGTGCTGATTTTGAAAGTTTGGGTAGAATTTATAGTGGAGCAGCTGCCTCTTCTTCGTCCTTAATTTCTAAATCAGAATCTTGTAGTTTGGCTGTTAGTACCCTGAAAAGTTCTTCTTCTGTAGATTCCTTTTACAAGTTGAGATGTGAGGTTTTGGGAGCAAATATTGTGAAGAGTGGTTCAAGAACGTTTGCCGTTTACTCTATATCCGTTACAGATGTAAATAATAACAGTTGGTCTATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTGCATCGACGCCTGAAAGAGTTCCCTGAGTATCATCTTCATTTACCACCAAAACATTTTCTGTCAACTGGTTTAGATGTAGCAGTCATTCAAGAGCGGTCTGAATTGCTTGATAAATATTTGAAGAAACTTATGCAGCTACCTACAGTTTCAGAATCAATTGAACTATGGGACTTTCTGAGTGTTGACTCTCAGACGTACATATTCTCAAATTCTTTTTCTATCATGGAAACGTTACCAGTTGGCCTGGATACGACGAAGCCATCTGAGAAGACTAAAATCAGTTCTGAAAGTAAAGAGGCTGTTTTGCGAACAAGAAATAATGCTGTGGCTGATGGAGTGAGGCCAAAAGTAAATAGCATGCCTCTTTCTCTACCAACAAAAAAGAATACACGGGAATCTAGACAGTCATTTGACAACTCTGGAAGCAACACAGATGTTCTAGCCTGGAAGAGTGCATCTTCTCCCAATAACTTGCCGAAGTCAGTGAAAGGGAGAGGTAGTTCAGACGTGGCCTCCGATGTGCACCATGATACTGCTGACACTGTTCCAACAGAGTGGGTGCCACCAAATTTAAGCGTGCCCATATTAGATCTGGTTGATGTTATCTTCCAGCTGCAAGATGGTGGATGGATTAGGAGGCAGGCTTTCTGGGTTGCTAAACAAGTCTTACAACTAGGAATGGGTGATGCCTTTGATGATTGGTTGTTAGAGAAAATTCTGCTTCTCCGAAAGGGATCAGTGATTGCTTCAGGGGTCACGCGAGTTGAGCAAATACTCTGGCCTGATGGAATTTTCCTAACCAAGCATCCTAATCGACGACCACCACCTACCAGTCCATCTCAGAACTCACCTACTGGACATCAACCTACACAAGTGTCTTCTCCAAGGATGGACGATGAGCAGCAACAGGAGGCAGATCGGCGTGCAAAGTTTGTATATGAGCTAATGATTGATAATGCACCACCAGCAATTGTAGGTCTTGTTGGAAGGAAAGAGTATGAACAATGTGCTAGGGATCTTTACTTTTTTCTTCAGTCATCTGTTTGCATGAAGCAGCTAGCTTTTGACCTCCTGGAGATGCTGCTTTTGTCAGCATTTCCAGAACTTGATGATGTATTCAAGCAGGTGCATGAAGAAAAGCATAAATTTGGCGAGTTGATAAAGTAA 3342 0.4144 MSMPKPNQVAVRDLVEEAKKRIVILIVCVVGLSYLMSLTSSSVWVNLPTAASLIIVFRYLSLDYEMKRKAAAYNNKAGSTSIQSSKLPIENPKAVAKFEWRAKVNSPVVEDAIDHFTRHLISEWVTDLWYSRLTPDEEGPEELVQIINGVLGEISGRMRNINLIDFLIRDLVNLICTHLELFRAAHSKIEKQHTGSLTIESRDLELKIVLAAEDKLHPALFSSEAEHKVLQHLMNGLMSVTFKSEDLQCSFFRYTVRELLACAVMRPVLNLANPRFINERIESVVINKTKVNKGVGAAKGVSHTKADESQTSSDHFSKYLDPSVTGVELMQLSNGQSRNAEPSAERNARDNISRDPLLSIDARSSRSWNSLPENSQINGDQGIQRNRSGGEWGDILDVVSRRKTQTLAPEHFENVWAKGKNYQKRDGENQSNEQVPQHPPKGKSAKVDHMKAISGPKEKDTRSKLNPSKGGHINSGYSSQFTVEDASFHGDKNGSTCSSVTSYKGDEHNHSSMQISESESNTSYTSEDDETSAVTGLDSPGTKVWDGRSNRKQAVSYVHHPLENFDNHSTKKKNKSRSRYPRLFRTQSGSKRSRPSDHKTHMWQEVERSSFLSGDGQDILSTSKSLVNSEDSSDGADFESLGRIYSGAAASSSSLISKSESCSLAVSTLKSSSSVDSFYKLRCEVLGANIVKSGSRTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFPEYHLHLPPKHFLSTGLDVAVIQERSELLDKYLKKLMQLPTVSESIELWDFLSVDSQTYIFSNSFSIMETLPVGLDTTKPSEKTKISSESKEAVLRTRNNAVADGVRPKVNSMPLSLPTKKNTRESRQSFDNSGSNTDVLAWKSASSPNNLPKSVKGRGSSDVASDVHHDTADTVPTEWVPPNLSVPILDLVDVIFQLQDGGWIRRQAFWVAKQVLQLGMGDAFDDWLLEKILLLRKGSVIASGVTRVEQILWPDGIFLTKHPNRRPPPTSPSQNSPTGHQPTQVSSPRMDDEQQQEADRRAKFVYELMIDNAPPAIVGLVGRKEYEQCARDLYFFLQSSVCMKQLAFDLLEMLLLSAFPELDDVFKQVHEEKHKFGELIK 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02426 1113 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 7 1111 - -
Car06g02426 1113 Pfam Sorting nexin C terminal 935 1072 IPR013937 -
Car06g02426 1113 SMART PXA_3 110 289 IPR003114 -
Car06g02426 1113 MobiDBLite consensus disorder prediction 490 602 - -
Car06g02426 1113 MobiDBLite consensus disorder prediction 490 538 - -
Car06g02426 1113 MobiDBLite consensus disorder prediction 442 466 - -
Car06g02426 1113 PANTHER PX SERINE/THREONINE KINASE PXK 7 1111 - -
Car06g02426 1113 Pfam PXA domain 106 283 IPR003114 -
Car06g02426 1113 Gene3D - 679 795 IPR036871 GO:0035091
Car06g02426 1113 SMART PX_2 683 787 IPR001683 GO:0035091
Car06g02426 1113 MobiDBLite consensus disorder prediction 1008 1023 - -
Car06g02426 1113 MobiDBLite consensus disorder prediction 334 391 - -
Car06g02426 1113 MobiDBLite consensus disorder prediction 840 899 - -
Car06g02426 1113 MobiDBLite consensus disorder prediction 423 478 - -
Car06g02426 1113 MobiDBLite consensus disorder prediction 847 888 - -
Car06g02426 1113 MobiDBLite consensus disorder prediction 992 1028 - -
Car06g02426 1113 Pfam PX domain 710 787 IPR001683 GO:0035091
Car06g02426 1113 SUPERFAMILY PX domain 680 788 IPR036871 GO:0035091
Car06g02426 1113 ProSiteProfiles PX domain profile. 679 791 IPR001683 GO:0035091
Car06g02426 1113 MobiDBLite consensus disorder prediction 358 385 - -
Car06g02426 1113 ProSiteProfiles PXA domain profile. 106 285 IPR003114 -
Car06g02426 1113 MobiDBLite consensus disorder prediction 296 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02426 Car-Chr6 26782141 26793979 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02426 K17925 - gmx:100778731 1729.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02426 06 26782141 26793979 Car06g02426 06 26782141 26793979 ECH