Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02424 ATGCATAATCGAAAATCGAAAATGGATAACAATCTTAACAATGAAGAACAAAACCCTAATTTCACAGCTTTCCCTTTCAAACCGTATTCTATCCAAATCGATTTCATGAACGCACTCTATCAATCTCTCAATCAAGGTGGCGTCTCCATGTTAGAAAGCCCAACCGGTACTGGGAAAACAATGAGTGTTATTTGTAGTGCATTGCAGTGGGTGATTGATCGACGGCAGCGGCAAGAAGAAGAAGATGCTGTAGGGTCTGTGGTTGGGAAGAATCAAGCTTCAGATGATGAACCTGATTGGATGAGAGATTTTGTTGTTAACAATAGCAGTGATAATAAGAAATTCAAAGAGGGAAAAAGAAAGAATAAAAAGGAAAATTTTAAGTCTGTGTTAGGAAAATCTGATAATAATGATTATAAAAACAGTAATAATAATGGTAACTTGAAGAAGAAAATTGATGAAGTGAGTGATAATGAAGATGAGTTTTTACTTGAAGAATATGAGAGTGAAGATGAGAAATCTCAGGGTAGTAGTGTAGCATGTAAAAGGAAAGCAAGTAAAAGTAGTTTTAGTTCTTCGAGTGAAGACGAGTCTCatgatgatgatgatgaagaggaagaggagaagaagttaaagGTTTATTTTTGTAGTAGGACGCATTCGCAACTTTCGCAGTTCATAAAGGAGTTGAGGAAGACAGTTTTTGCTGATGAAATGGGTGTTGTTAGTTTAGGTTCAAGGAAAAATCTCTGTATCAATCAAGAAGTACTTGCACTTGGAAACTCCACACGCATAAATGAACGATGCTTGGAACTTCAAAAGAAAAAGAAAAATGATGCTACAAAAGTTAAGAACTTAAAAGTAGGTACGGGAGTACGCAGAACAAAGGCCTCTGGTTGCCCAATGCTTAGAAAACATAAATTACAAAAAGAATTCAGGAATGAGGTATCTCAACAAGGGCCTTTGGATATTGAAGATCTTGCTAACCTTGGTAGAACTATAGGAGCTTGTCCATATTATGGTTCTAGAAGCATGGTTCGGAGAGTTGATCTTGTGGTCCTACCATATCAATCTCTTCTTTCAAAATCATCTCGTGAAGCACTTGGTCTGAATTTGAAATCCAACATTGTTATAATAGACGAGGCTCATAATTTGGCTGATTCACTTATCAACATGTATGACTCCAAAATTACTTTATCACAGCTAGAGAATGTGCATTGCTGTGTAGAGCGGTACTTTGTGAGATTCCGGAACCTTTTGGGACCTGCTAATAGGAGATATATTCAAACTCTGATGGTCCTCATACAAGCATTTCTCCGAGTACTACTCAATGAGAAAGATGGAAAGCTAATAGAACAGGCTTCTGAAGAAAGGAAAACCTCTGGTTTTACTATGACCATCAATGATTTTTTATTTGAACTAAATATCGACAATATCAACTTGGTCAAATTGGTGAAGTACATAAAGGAAAGTAATATCATGCACAAGGTTAGTGGCTATGGAGAAAAGCTGGCTACATTGGAAAAGGTATCAGCACTTAATATAACAGGGGAACACGGTGAAGATGGAAGCTGTCAGTCTGCTTTCCAGGCATTAGCTAACATGTTGCTATCCCTGGTAAACAAGGACAGTGATGGAAGGATAATAATTTCCAGGTCTAGTTCAGCAAGCTTCAGGAAACAAGGTCAAGGATATATTAAATATGTAATGCTCAGTGCAGAGAAGATTTTCTCCGAGATTGTAGATGAAGCACATGCCGTCGTGTTAATAGGGGGAACACTTCAGCCAATAGAAGAGACAAGGGAGAGACTCTTTCCATGGTTACCACCAAATGAGTTGCATTTCTTTTCTTGTGGTCACATTGTCCCTCCAGAGAGCATTATGCCAATTGCCGTTTCCCGTGGGCCTACTGGCCGCTCCTTTGATTTCAGCTATAGCTCAAGGAGCTCAGCAGACATGATACGGGAGTTAGGTCTTTTGTTATGCAACTTGGTGACTGTGGTTCCACAAGGAATTGTAGTCTTCTTCCCTTCTTTTGATTATGAAAGTAGAGTCTATGAAAACTGGGAGTCTTCTGGCATCCTCGAAAGGATTACAAAGAGGAAACGTTTCTTTCGAGAGCCTAGAAACAATATGGATGTTGAATCTGTTCTCAAGGAATATAAAGATACCATTTATACTCCATCAAGTGTGAATTCAGAAGTGAACCAAGCATCTCATACTGGTGCTGTACTTCTTGCTGTTGTTGGTGCAAAGTTATCTGAAGGGATCAACCTGAGCGATGGGATGGGTCGATGCATAGTCATGGTTGGTCTGCCATATGCTAGCCCATCTGACATTGAGTTATTGGAGAGGATAAAACACATTGATGGTTTTAGAAATTCAAAGTCCCTTGAAAATCCTGGATTTTCTGCTAGTTATGATATATATGGTGGAGATATACAAGATGGTTTCGGCATATTAAGAAGTTGCAGTCACAGGGGAAAAGAGTATTACGAGAATCTCTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCAATTCGTCACATCAATGACTATGCAGCTATTTTATTGGTTGACACAAGGTATGCGTCTGATTCCTCAAAACGGAGCTTTAACCACCCAACCACCAAGCTCCCCAACTGGATAAAAGACCGTCTTGTTTCTTCTTCCAAAAACTATGGGGAAGTGCATAGGTTGCTGCATCAATTTTTTAAACTCAAAAAGACATGTTGCCAATAG 2745 0.3832 MHNRKSKMDNNLNNEEQNPNFTAFPFKPYSIQIDFMNALYQSLNQGGVSMLESPTGTGKTMSVICSALQWVIDRRQRQEEEDAVGSVVGKNQASDDEPDWMRDFVVNNSSDNKKFKEGKRKNKKENFKSVLGKSDNNDYKNSNNNGNLKKKIDEVSDNEDEFLLEEYESEDEKSQGSSVACKRKASKSSFSSSSEDESHDDDDEEEEEKKLKVYFCSRTHSQLSQFIKELRKTVFADEMGVVSLGSRKNLCINQEVLALGNSTRINERCLELQKKKKNDATKVKNLKVGTGVRRTKASGCPMLRKHKLQKEFRNEVSQQGPLDIEDLANLGRTIGACPYYGSRSMVRRVDLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLINMYDSKITLSQLENVHCCVERYFVRFRNLLGPANRRYIQTLMVLIQAFLRVLLNEKDGKLIEQASEERKTSGFTMTINDFLFELNIDNINLVKLVKYIKESNIMHKVSGYGEKLATLEKVSALNITGEHGEDGSCQSAFQALANMLLSLVNKDSDGRIIISRSSSASFRKQGQGYIKYVMLSAEKIFSEIVDEAHAVVLIGGTLQPIEETRERLFPWLPPNELHFFSCGHIVPPESIMPIAVSRGPTGRSFDFSYSSRSSADMIRELGLLLCNLVTVVPQGIVVFFPSFDYESRVYENWESSGILERITKRKRFFREPRNNMDVESVLKEYKDTIYTPSSVNSEVNQASHTGAVLLAVVGAKLSEGINLSDGMGRCIVMVGLPYASPSDIELLERIKHIDGFRNSKSLENPGFSASYDIYGGDIQDGFGILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFNHPTTKLPNWIKDRLVSSSKNYGEVHRLLHQFFKLKKTCCQ 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02424 914 SMART ultradead3 24 461 IPR014001 -
Car06g02424 914 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 18 431 IPR014013 GO:0005524
Car06g02424 914 Gene3D - 173 420 IPR027417 -
Car06g02424 914 TIGRFAM rad3: DNA repair helicase (rad3) 149 788 IPR013020 GO:0003678
Car06g02424 914 MobiDBLite consensus disorder prediction 109 131 - -
Car06g02424 914 Gene3D - 25 88 IPR027417 -
Car06g02424 914 Gene3D - 639 880 IPR027417 -
Car06g02424 914 CDD SF2_C_XPD 625 864 - -
Car06g02424 914 MobiDBLite consensus disorder prediction 79 154 - -
Car06g02424 914 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 19 898 IPR045028 -
Car06g02424 914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 399 IPR027417 -
Car06g02424 914 SMART Cxpdneu3 679 866 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Car06g02424 914 SMART deadxpd 20 425 IPR006554 GO:0003678|GO:0016818
Car06g02424 914 MobiDBLite consensus disorder prediction 132 149 - -
Car06g02424 914 PANTHER ATP-DEPENDENT DNA HELICASE DDX11-RELATED 19 898 IPR028331 -
Car06g02424 914 Pfam Helicase C-terminal domain 661 874 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Car06g02424 914 Pfam DEAD_2 215 402 IPR010614 GO:0003677|GO:0003678|GO:0005524
Car06g02424 914 MobiDBLite consensus disorder prediction 166 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02424 Car-Chr6 26763931 26769665 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02424 K11273 - gmx:106794132 1319.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02424 06 26763931 26769665 Car06g02424 06 26763931 26769665 ECH