Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02416 ATGATCATACAAATGTTTAGGTGGATATTGAAGCCTAAATTCTATTCAAAATGTATATCATATGTGAAGTGTATAaagataagattagagaggatagagaagaagagaagagCTGTTGAGAAGTTTACGAAGAGTGATATTGCTGAACTTCTTAGGAGAGGGCTTGACTATGATGCATATAAAAGGGCTGAAGGACTTTTGTTTGAGCAAAAAATGTTATCATGCTATGAATTAATTGAAAAGTTTATTGGATGTATATCTGATCATCTTGAAGACATAACTAAGCAGAGTGAATGCCCTGAGGAATGCAAAGAAGCTGTGCCATCATTGATGTATGCTGCAGCAAGAATTTCTGATTTACCAGAATTGCGTGACCTTAGAACTTTGTTTATAGAGAAATATGGGAATTCTCTTGAACCATACATAAATAAAGAGATTGTTGAGAAGTTGAGAAGAGATCCTTCTACAAGGGAAATGAAGATTAGGTTATTATATGATATAGCACAAGAGTTCTCTATAGATTGGAATGCAAAGGCTTTGATGAAAAGACTTTATACACACCCATCATTATATGAAGGGAGGCCTATGTCTGATAACAACAGAGACAACATAGTCAACATTGGAGGAGGAGAACACCAATACAGTAGTGATTATGATGATGATGAAACAAGCACAGATACATCATCACATCATGGAAGAAAAGATAGTTCAAGTTCATTTGGAAGCATATCTGAGGATGATCATCAAAAAGTAGCACAAGAAATCAAGAAACCAAATTCATTTTTGCTCATTCCACCACCTTACCTCAAACAAAATGCTAATAACAACAAAAGTGAAATCAATTCCAACAAAACAACAAATTTAGAAACACTACAGAAGACTGATTCAAGTGGAATGAAACCATCAACTTCAGATGATACAATATCATCATCACAAGGGCTTGCACAAATACCAGGCGGCGCGTGGCGTGTGCCTACTACTCTGCCTGATTATGATGATTTAATAGCTCGTCTCAAAGCTTTCACAGGAAGATCATAA 1038 0.343 MIIQMFRWILKPKFYSKCISYVKCIKIRLERIEKKRRAVEKFTKSDIAELLRRGLDYDAYKRAEGLLFEQKMLSCYELIEKFIGCISDHLEDITKQSECPEECKEAVPSLMYAAARISDLPELRDLRTLFIEKYGNSLEPYINKEIVEKLRRDPSTREMKIRLLYDIAQEFSIDWNAKALMKRLYTHPSLYEGRPMSDNNRDNIVNIGGGEHQYSSDYDDDETSTDTSSHHGRKDSSSSFGSISEDDHQKVAQEIKKPNSFLLIPPPYLKQNANNNKSEINSNKTTNLETLQKTDSSGMKPSTSDDTISSSQGLAQIPGGAWRVPTTLPDYDDLIARLKAFTGRS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02416 345 Pfam Regulator of Vps4 activity in the MVB pathway 22 174 IPR005061 GO:0015031
Car06g02416 345 MobiDBLite consensus disorder prediction 269 316 - -
Car06g02416 345 MobiDBLite consensus disorder prediction 214 233 - -
Car06g02416 345 PANTHER IST1 FAMILY MEMBER 12 343 IPR005061 GO:0015031
Car06g02416 345 Gene3D - 10 181 IPR042277 -
Car06g02416 345 MobiDBLite consensus disorder prediction 190 249 - -
Car06g02416 345 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 12 343 - -
Car06g02416 345 MobiDBLite consensus disorder prediction 262 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02416 Car-Chr6 26679515 26682514 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02416 - - gmx:102665874 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02416 06 26679515 26682514 Car06g02416 06 26679515 26682514 ECH