Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02373 ATGCGATTAACTTCTTCAATGGGATTCGGGTCGGGTTCTTTAATGTGGTTTCGAAAGGGTATTCGGATCCATGATAATCCGGCTCTTGAATTTGCTTCACGAGGTTCCTCTCATCTTTACCCTCTTTTTATTATTGACCCGCATTACATGGAACCCGACCCGAACGCTTTTTCACCCGGTTCTTCACGTGCGGGTCTTAACCGTATCAATTTCTTGCTTCAGAGTCTCGTTGATCTTGATGTTAAGCTTAAGAAGCTTGGTTCACGACTATTGATTCTTCACGGTGATCCGAATGAGGTTCTCGTTCGATGCTTGAAAGAGTGGAACATTGGAAAGCTGTGCTTTGAATATGACACTGATCCATATTATCAGGCTATGGATATTAAAATCAAGGACTTTGCTCTTGCATCAGGAATTGAGGTTTTCTCTCCTGTAAGCCATACACTTTTCAATCCCATGGAAATTATACAGAAGAATGGAGGGAAGCCGCCACTTAGTTATCAGTCATTTGTCAAACTTGCGGGGGATCCGCCGTCTCCTCTCTTAACCAAGTATTCTTCGCTCCCAGCGGTTGGCCATCTTGGAAGTTGTGATATTTCTGAAGTTCCAACCATCAAAGACCTTGGATATGAAGATGCTAAACTGGAGGAGTTTTCTTTCTCTCCTTTCAAAGGTGGTGAATCAGAAGCATTGAAGCAATTGGAAGCATGCATGAAAGACAAGATGTGGGTGGCAAACTTTGAGAAACCCAAGGGTAATCCATCTGCATTTTTTAAGCCAGCAACAACAATTTTATCACCTTACTTGAAATTTGGTTGTCTCTCTTCCAGATATTTCTACCACTGCATTCAAGATGTATATAAAAGTTTGCCAAAACATACTTCACCACCTGTTTCTCTGCTAGGACAGTTGTTGTGGCGAGACTTCTTTTACACGGCAGCTTTTGGGACTCCAAATTTCGATAGGATGAAAGGAAATAGGATATGCAAGCAGATTCCTTGGAAGGATGATGATAAACTGTTTGAGGCTTGGAGGGATGCTAAGACAGGATTTCCTTGGATCGATGCTATCATGGTCCAGCTACGCCAATGGGGTTGGATGCATCATTTAGCTCGACATTCTGTTGCGTGTTTTCTAACTCGAGGCGATCTGTTTATTCATTGGGAAAAAGGACGTGATGTCTTTGAGAGGCTTCTGATTGATTCAGATTGGGCAATTAATAATGGAAACTGGATGTGGCTTTCATGTTCATCTTTCTTTTATCAGTATCATCGTATTTATTCCCCAACCACATTTGGTAAGAAGTATGACCCCAATGGTGACTATATTAGACATTTTCTTCCAGTTTTAAAAGATATACCCAAGGAGTACATCTATGAACCATGGACTGCTCCTCTAAGCATCCAAACCAAAGCTAATTGCATAATTGGAAAAGACTACCCTATGCCAGTTGTTTCTCACGATTCTGCAAGTAAAGAGTGTCGAAGGAAAATGGGCGAGGCGTATGCATTGAATAAAGCACTGAATGGTTTGGTAAGTGAAGATGATCTGAAAAACTTGAGGAGGAAATTGGATGAGAGTGAAGAGCAAGGAACTAAAGCTAAAAAATCTAGGCAACTGCTAATTGGCTGA 1632 0.4142 MRLTSSMGFGSGSLMWFRKGIRIHDNPALEFASRGSSHLYPLFIIDPHYMEPDPNAFSPGSSRAGLNRINFLLQSLVDLDVKLKKLGSRLLILHGDPNEVLVRCLKEWNIGKLCFEYDTDPYYQAMDIKIKDFALASGIEVFSPVSHTLFNPMEIIQKNGGKPPLSYQSFVKLAGDPPSPLLTKYSSLPAVGHLGSCDISEVPTIKDLGYEDAKLEEFSFSPFKGGESEALKQLEACMKDKMWVANFEKPKGNPSAFFKPATTILSPYLKFGCLSSRYFYHCIQDVYKSLPKHTSPPVSLLGQLLWRDFFYTAAFGTPNFDRMKGNRICKQIPWKDDDKLFEAWRDAKTGFPWIDAIMVQLRQWGWMHHLARHSVACFLTRGDLFIHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYHRIYSPTTFGKKYDPNGDYIRHFLPVLKDIPKEYIYEPWTAPLSIQTKANCIIGKDYPMPVVSHDSASKECRRKMGEAYALNKALNGLVSEDDLKNLRRKLDESEEQGTKAKKSRQLLIG 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02373 543 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 318 542 - -
Car06g02373 543 MobiDBLite consensus disorder prediction 523 543 - -
Car06g02373 543 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 11 149 IPR006050 -
Car06g02373 543 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 13 191 IPR036155 -
Car06g02373 543 Coils Coil 510 537 - -
Car06g02373 543 Gene3D - 147 311 - -
Car06g02373 543 PANTHER (6-4)-PHOTOLYASE, ISOFORM A 13 508 - -
Car06g02373 543 Gene3D HUPs 14 225 IPR014729 -
Car06g02373 543 Pfam DNA photolyase 13 172 IPR006050 -
Car06g02373 543 Pfam FAD binding domain of DNA photolyase 302 498 IPR005101 -
Car06g02373 543 PANTHER CRYPTOCHROME 13 508 IPR002081 -
Car06g02373 543 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 215 505 IPR036134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02373 Car-Chr6 25800863 25806080 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02373 K02295 - gmx:100780347 976.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02373 06 25800863 25806080 Car06g02373 06 25800863 25806080 ECH