Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02345 ATGGAGAACGATACTCAAACTGATGCCAAAGATGAAGTCTTGTCGGTTGAGCTTTCAGCTCCTCCTTCTTGGAAGAAACTGTTCTTCCCTAAGAAAGTAGGAACACCAAGAAAAAGCGAGATTGTATTCGTTGCTCCAACTGGAGAAGAGATAAGTTCCAAAAAACAATTGGAGCAGTACCTGAAAGTACATCCCGGGAATCCCAACATATCAGAGTTTGATTGGGGAACCGGTGAAACCCCGAGGCGGTCAGCAAGGATTAGCGAGAAGGTCAAATCAACTCCTCCGCCGGCAGAAACTGAGCCTCCTAAGAAACGTAGCCGAAAATCATCTGGTTCAAAGAAGGATGGCAAGGAAACTGAAACCGATCAATCGCCTTCAGCGGAAAACAAGGCAAAGTCTTCTGTGGCCGATCCCAATGACACTGACAACAACAACGACAATGATAAAACAAAGACCGATGCTGAGGAAATTAAGCAAAGTAACGTGGAAGGTGAAAATGTGACTTCCGAGAAGCCTCAAGTGGAAGAAACATCAAAGGTGGAACAAGGAGAGCAACTTGTCGAGGAAGCTTTGATTGCTGTGGTGGTTGAAAAACCGCAAGAGGAGGCACCGGTTGAATCAGAAAAGGAAAATGGTACAATTGACAGTAATAAGCAGGAAAAAATCGACGCTGTGGAAAACGAAGGAGCTGAGAAAGTGAGTCTCGATGTTGAAGATATTAACGGTAAGACCGAAATTAACGAAGGAGCTGAGAAAGCGAGTCTCGATGTTGAAGATATTAACAGTAAGACTGAAATTAATGAAGGAGCTGAGAAAGCGAGTCTCGATGTTGAAGATATTAACAGTAAGACCGAAATTAACGAAGGAGCTGAGAAAGCGAGTCTCGATGTTGAAGATATTAACGGTAAGACCGAAATTAACGAAGGAGCTGAGAAAGCGAGTCTTGATGTTGAAGATATTAACGGTAAGACCGAAATTTCAGCAAGTGATGAAAAAGAAACCATTCAAGGTGAGGAGCAAGTAAAGAAAATGGTTGACAATGAAAGTGTTATTTGGAGCAGTGCACAATGA 1074 0.4292 MENDTQTDAKDEVLSVELSAPPSWKKLFFPKKVGTPRKSEIVFVAPTGEEISSKKQLEQYLKVHPGNPNISEFDWGTGETPRRSARISEKVKSTPPPAETEPPKKRSRKSSGSKKDGKETETDQSPSAENKAKSSVADPNDTDNNNDNDKTKTDAEEIKQSNVEGENVTSEKPQVEETSKVEQGEQLVEEALIAVVVEKPQEEAPVESEKENGTIDSNKQEKIDAVENEGAEKVSLDVEDINGKTEINEGAEKASLDVEDINSKTEINEGAEKASLDVEDINSKTEINEGAEKASLDVEDINGKTEINEGAEKASLDVEDINGKTEISASDEKETIQGEEQVKKMVDNESVIWSSAQ 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02345 357 MobiDBLite consensus disorder prediction 202 237 - -
Car06g02345 357 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 8 262 IPR039622 -
Car06g02345 357 MobiDBLite consensus disorder prediction 143 161 - -
Car06g02345 357 MobiDBLite consensus disorder prediction 63 237 - -
Car06g02345 357 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 10 80 IPR001739 GO:0003677
Car06g02345 357 MobiDBLite consensus disorder prediction 99 126 - -
Car06g02345 357 Gene3D - 11 84 - -
Car06g02345 357 SUPERFAMILY DNA-binding domain 4 107 IPR016177 GO:0003677
Car06g02345 357 MobiDBLite consensus disorder prediction 170 184 - -
Car06g02345 357 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11 8 262 - -
Car06g02345 357 MobiDBLite consensus disorder prediction 127 142 - -
Car06g02345 357 Pfam Methyl-CpG binding domain 18 79 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02345 Car-Chr6 25326160 25329455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02345 - - lja:Lj3g3v2200290.1 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02345 06 25326160 25329455 Car06g02345 06 25326160 25329455 ECH