Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02344 ATGCTTAGAGTTCAACAACAAATGGTTTTCTCTTTCAAGTGTTCATTCTTTCTTTCGCTTCTCATTTTATCAATAACATTTTCTCAAGTTTTAGGTAACAAAGCATTTACTGGAACATATGGAGTGAACTATGGTAGAATAGCTGATAATCTACCTTCCCCTGAAAGTGTAGTTACATTACTCAAAGCTGCAAAAATCAAGAACACAAAAATCTATGATTTTGATCCTAAAGTCCTAAGTGCATTCAAAGGTTCAGGAATAGGAATTATAATTGGACTTCCTAATGAATTTTTGAAAGACATAAGCGTCGCCGAAGATCGCGCGATGAATTGGATCAAAGAAAATGTTCAACCATTTTTACCAGGAACAAAAATTGTTGGCATTACAATTGGAAATGAAATCTTAGGAGGAGGTGATATTGAACTTTGGGAAGCTTTGTTACCAGCAGCTAAAAATGTCTATAGTGCCCTTAATAGACTTGGTTTAACACATCAAATTGAGGTTTCTAGTCCACATTCTGAGGCTGTTTTTGCCAATTCATTTCCTCCTTCTTCATGTACATTTAGGGATGATATACTTCCTTACATGAAACCTTTATTGCAATTCTTTTCACAAATTGGTACCCCTTTTTATATAAATGCATACCCTTTTTTGGCTTATAAAAATGACCCTCAACATATTGACGTAAACTATGCTTTATTTAAAAAAAATCCTGGCATTTACGATGCCAAGACTAAATTACATTATGACAATATGTTTGATGCGCAAATTGATGCCTCTTATGCTGCATTGGAGAAAGTCGGATTTGAGAAAATGGAAGTGATTGTTTCTGAGACGGGTTGGGCGTCTCGTGGAGATGACAATGAAGCCGGTGCAAATTCGAAGAATGCAATGACTTATAATAAAAATATGCGAAAGAGGTTGCTTAAGAAAAAAGGGACACCTTATAGGCCCAAAATGTTGGTTAGGGCTTATATATTTGCTTTGTTTAATGAGAATTTGAAGCCTGGCCCAACATCAGAAAGAAACTTTGGATTGTTTAATCATGATGGAAGTATTGCTTATGATATTGGTTTTACTGGACTTGTATCTTCCTCAGCTACCTCCTCTTTGATTTCCTTCAAGGGTATTGGGTCTTCATTCGTGATGGTTTCAACAAGTTGTACTGCAATTCTTCTTCTTCTTTTAGCATTGTAA 1197 0.3534 MLRVQQQMVFSFKCSFFLSLLILSITFSQVLGNKAFTGTYGVNYGRIADNLPSPESVVTLLKAAKIKNTKIYDFDPKVLSAFKGSGIGIIIGLPNEFLKDISVAEDRAMNWIKENVQPFLPGTKIVGITIGNEILGGGDIELWEALLPAAKNVYSALNRLGLTHQIEVSSPHSEAVFANSFPPSSCTFRDDILPYMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDVNYALFKKNPGIYDAKTKLHYDNMFDAQIDASYAALEKVGFEKMEVIVSETGWASRGDDNEAGANSKNAMTYNKNMRKRLLKKKGTPYRPKMLVRAYIFALFNENLKPGPTSERNFGLFNHDGSIAYDIGFTGLVSSSATSSLISFKGIGSSFVMVSTSCTAILLLLLAL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02344 398 Pfam Glycosyl hydrolases family 17 41 359 IPR000490 GO:0004553|GO:0005975
Car06g02344 398 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 387 IPR044965 GO:0004553|GO:0005975
Car06g02344 398 SUPERFAMILY (Trans)glycosidases 40 358 IPR017853 -
Car06g02344 398 Gene3D Glycosidases 39 364 - -
Car06g02344 398 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 16 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02344 Car-Chr6 25320904 25323824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02344 35 373 Glycoside Hydrolase AT3G15800 76.522 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02344 - - gmx:100789056 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02344 06 25320904 25323824 Car06g02344 06 25320904 25323824 ECH