Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02340 ATGGCGTTGATAACTTCTCAACCCAAAAACCCCATTCTCCATAATCACTTCACAACTCTTCATTGTTCAATTCCACAATTCAATAGGTCCAAATTAACATTTGGGTCATTCTCAAACAATGTAAAAACCAATAAAGTTTGTAACTTTAACACAAATTCAATAAAATTTCAGTTGAAAAAAAACAACCCTTTTACTTATAATCTTCCAATTATAGCTAAATCCAATGCTGCAATTGGAGAAGCTTCTTTGGAACAAGAGGAAGAAGTTCCATTGAAATACAGAAAGATTTTTCTATCTGATGTTGAAGTGAAGAGAGAAAGGAAATTATTTTTGGGTAGGAAATGGAATTCATTGGATGTTGCAACAGCTGGAATTGTATTGTCAATGCATTTGTTATGCTTATTTGCTCCATTCAATTTCAATTGGCCAGCTTTTTGGGTTGCTGTTTCTCTTTATGTTGTTACTGGTCTCTTTGGAATCACACTGTCTTTCCATAGACATCTTTCTCATAAAAGTTTTAAGCTTCCTAAATTGCTTGAATATTTGTTTGCTTATTGTGGTGTTCTTGCTCTTCAGGGAAATCCAATTGATTGGGTTAGCACTCATAGGTATCATCACCAGTTTTGTGATTCTGAGAAGGACCCTCATAGCCCTATTGAAGGATTTTGGTTTAGCCATATGAGTTGGTTATTTGATACCAATGCTATGGTAGAAAGGTATGGAAAACCAACCAATGTTGGTGATTTAGAGAAACAGTCATTTTATAGATTTATCAGAAGCACTTACATTTTGCATCCATTTGCTTTGGGAGCTCTTCTATATGCTATTGGTGGATTCCCTTTTATTGTTTGGGGAATGGGAGTGAGGATTGTTTGGGTTTACCACATCACTTGGCTTGTAAATTCAGCTTGCCATGTTTGGGGGAATCAGCCTTGGAACACAAAGGACTTATCAACAAATAATTGGTGGGTGGCTTTGCTTGCATTTGGTGAAGGTTGGCACAATAACCACCATGCATTTGAATATTCAGCTAGACATGGTTTAGAGTGGTGGGAAATAGACATGACTTGGTACATGGTCAAATTTCTTCAAGCTATTGGTTTGGCAACTGAAGTGAAAGTACCAAGTGATATACAAAAGCAAAGAATGGCATTCAATAATAATGATGGAATAGCCACATGA 1182 0.3613 MALITSQPKNPILHNHFTTLHCSIPQFNRSKLTFGSFSNNVKTNKVCNFNTNSIKFQLKKNNPFTYNLPIIAKSNAAIGEASLEQEEEVPLKYRKIFLSDVEVKRERKLFLGRKWNSLDVATAGIVLSMHLLCLFAPFNFNWPAFWVAVSLYVVTGLFGITLSFHRHLSHKSFKLPKLLEYLFAYCGVLALQGNPIDWVSTHRYHHQFCDSEKDPHSPIEGFWFSHMSWLFDTNAMVERYGKPTNVGDLEKQSFYRFIRSTYILHPFALGALLYAIGGFPFIVWGMGVRIVWVYHITWLVNSACHVWGNQPWNTKDLSTNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWEIDMTWYMVKFLQAIGLATEVKVPSDIQKQRMAFNNNDGIAT 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02340 393 CDD Delta9-FADS-like 141 373 IPR015876 GO:0016717
Car06g02340 393 PRINTS Fatty acid desaturase family 1 signature 165 185 IPR015876 GO:0016717
Car06g02340 393 PRINTS Fatty acid desaturase family 1 signature 202 231 IPR015876 GO:0016717
Car06g02340 393 PRINTS Fatty acid desaturase family 1 signature 287 308 IPR015876 GO:0016717
Car06g02340 393 PRINTS Fatty acid desaturase family 1 signature 330 344 IPR015876 GO:0016717
Car06g02340 393 PANTHER ACYL-COA DESATURASE 81 386 IPR015876 GO:0016717
Car06g02340 393 Pfam Fatty acid desaturase 142 360 IPR005804 GO:0006629
Car06g02340 393 PANTHER BNAC05G37460D PROTEIN 81 386 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02340 36 388 Lipid Metabolism Gene Families AT3G15850 65.915 3.64e-172 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02340 K20416 - gmx:100527024 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02340 06 25160780 25163762 Car06g02340 06 25160780 25163762 ECH