Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02330 ATGGCTCCAAAATCAGGGAAAGGGAAAACAAATAAAGCTAAGGCAGAGAAGAAGAAAAAGGAAGAGAAAGCAGTGGCACCTTCTCTTGTTGACATTACAATAGTTACTCCTTATGATTCACAAATTGTATTGAAGGGTATCTCAACTGATAAGATACTTGATGTGAGAAAGTTATTGGCTGTGAAGGTGGAAACATGTCATTTTACAAACTATTCTTTATCTCATGAGGTTAAAGGTCGGAGATTAAATGACAAAGTTGAAGTTGTTACCCTAAAGCCATGTGTTCTAAGAATGGTTGAAGAGAATTACTATGAAGAGGTTCAAGCAGTTACACACGTGCGAAGACTATTGGATATTATTGCCTGCACAACAAGGTTCGGGAAGCCCAAACGCACCATAACAGGCCCAGAATCAAAGCCCAAGAAAAACGGAAAGGCCCAAAATCAAAACAAGAGCAGCGTGAGTCCACCCGCGACACCCAATGGAGATTCCCGGGTCGGGTTACCGTCGTCGGATCCACCGGCGTCGCCGATTTCGGATAATGTCGGAATGGTGGCGATTCATCCAACGCCGAAGTTGTCAGATTTTTACGAATTCTTCTCTTTCTCTCATCTCACTCCTCCGATTTTACATTTGAAGAAATGTGAAACGAAGGATGAAGATGATAGACGCAAAGGAGATTACTTTCAGCTTCAGGTTAAAATCAGCAATGGGAAAATGATAGAAGTTGTTGCTTCAGAGAAAGGCTTTTATAGTGTTGGAAAGCTGTCTCTACAGAGTCACACATTGGTTGATCTTCTGCAACAGCTCAGTAGAGGTTTTTCAAATGCCTATGGATCATTGATGAAAGCTTTCTCAGACCGTAATAAGTTTGGCAATCTTCCATATGGACTCCGATCGAATACATGGCTTGTTCCTCCGTCTGTTGGCGAATCTCTTTCAAACTTTCCAGCTCTACCTGCTGAGGACGAAAACTGGGGTGGTAATGGTGGTGGCCAGGGAAGAAACAGAGCATACGATCTTCGACCGTGGGCGACAGATTTTGCTATATTGGCTTCTCTTCCTAGCAAAACTGAGGAGGAGAGGGTGATCAGAGATCGAAAAGCTTTTCTTCTTCACAGTCAGTTTGTTGATACATCGATATTTAAGGCCGCTGCAGCTATACAGCATGTGATGGAATCCAAGTCTAGTAAGAAGAATGAAATGAATTCTGTTCTGCATCAAGATCAAGTGGGAGACTTATTGATTGTAGTCAAACACGATGGGAATGGAAAGTTTGATTCTACACTGAATGAACCCAGTAAACAAAATGAGCATGTTCAGAAGAATTTAATTAAAGGGTTGTCTGCTGATGAAAGTGTCACCGTTAATGACACTTCTTCCTTGACCGTTGTTGTCGTTAACCACTGTGGATATACAGCAACAGTAAAGGTCGTCGGTAATGCAAACGCAAAGAAGCCTAAAGTTCAAGATATTGAAATAGATGACCAACCAGATGGTGGAGCAAATGCTCTTAACATCAATAGTTTGAGGGTATTGCTTCACAAGTCTGGAGCTGAGTTCTCAGAAGGGACATTAACATCCTTGTCAAATTTTGATGACTTGGATGCTTCTAAAGATCTTGTTAGGAAAGTGGTAGAAGAATGGACGGAAAAGATAAAAGAGGAGCCAAGTGTTTCGGAAAGGTCTATTCGATGGGAACTTGGTTCTTCTTGGATGCAGCATCTGCAAAAACAGGAAACTTCAACCGATGTCGGTTCCGATAACAAGAATGGAAATGTTGAGCAAGCTGTGAAAGGTCTTGGAAATCAATTTAAATTTTTGAAGAAGAGGGAAAAGAAAGCAAGTGAGTTAGATGGTACTGATTCTAGGGAGCCAAATAATGACGAATTAAGTAGTTCTAATGAATTGGAGACACTGCTTTCTAAAGAAGCCTTTTCGCGTATCAAAGAATCTGGATCTGGTCTTCATTTGAAGTCAGTGGATGAACTCATCAATATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGTTACGGACTTCGGATCCCTTGAACTTTCTCCTGTCGATGGTCGAACGCTGACTGACTTCATGCATTTAAGAGGACTAAAGATGGGATCATTGGGTGAAGTGGTTAAACTTGCAGAGAATCTTCCACACATACAATCACTTTGTATTCACGAGATGATTACTCGAGCATTCAAGCATCTACTTAAAGCTGTTATTGCTTCTGTCAACAATGTAGCTGATTTACCTTCAGTCATTGCATCAACACTGAATTTTTTACTTGGAGGGTGTCGAACTGAAGATACCGACCAAACATCAGGCGATGATCATCGCCTCAAAATTCATTGGTTACGTTCATTTTTGTCTCAAAGGTTTGGATGGACATTAAAAGATGAATTTCAACATTTGAGGAAGTTATCTATTCTCAGAGGACTATGTCACAAGGTTGGATTAGAATTGTTCCCTAGAGATTATGACATGGAGTCCCCTAAGCCCTTTGGAAAGTATGATATTATCAGTCTTGTTCCTGTCTGCAAGCATGTTGGGTGCTCTTCAATAGATGGGCGTAATTTATTGGAATCATCCAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTGAGTTATGGGACAAAGGCCTTAGCGAAGATGATGGCTGTTTGTGGTCCATATCATCGAAATACTGCAAGTGCATATAGTCTTCTCGCTGTGGTTCTCTACCACACAGGAGATTTTAACCAGGCTACCATTTATCAGCAAAAAGCCTTGGATATAAATGAAAGAGAGCTTGGACTTGACCATCCTGACACAATGAAAAGCTACGGCGATCTTTCTGTTTTCTATTATCGTCTGCAACATATTGAGCTGGCTCTGAAGTATGTTAATCGTGCCCTATTCCTCCTTCATTTCACATGTGGTCTGTCTCATCCAAATACGGCTGCAACATATATCAATGTAGCTATGATGGAAGAAGGCATGGGTAATGTTCATGTGGCCCTTAGGTATCTGCATGAAGCTCTTAAGTGCAACAAAAGATTGTTGGGCGCAGATCATATACAGACTGCAGCAAGCTATCATGCCATAGCCATTGCTCTTTCATTGATGGAAGCATATTCTTTGAGTGTGCAACATGAGCAAACTACACTTAAGATACTTCAAGCGAAGCTTGGTGCAGAAGATCTCCGGACACAGGACGCGGCTGCATGGCTAGAATATTTTGAATCAAAAGCAATAGAGCAGCAAGAAGCAGCGAAAAATGGAACTCCAAAGACAGATACATCCATTGCAAGTAAAGGTCACCTTAGTGTTTCAGATCTCCTGGATTTTATTAGTCCTGACAATGATTCAAAAGGAAATGATGCTCAAAGGAAACAGCGGCGTCCAAAGATACTTCCAATAAGTGATAACAACGGTCAAGAACATGATGATGCTGCTGCAATAGCGGATGACGGTGTTTTGGTTGACAACGTAAAAGATGTCAAAACAACGGTAGAAGGAAATGTCAATGAAACAAACGCCACACATGATTCCGATGAACCAAAAGATATTGGTGGTGATCTCAGCAGGCACAAGCCAGTGACAAGCGAAGCTGTTTATGAGACGTCGTCCGATGAAGGTTGGCAAGAAGCCAATTCAAAAGGGCGGTCAGGTAACGGTGCTAACCGCAAGTCCGGGCGCAGACAACGGCCTAATCTATCGAAGCTCAGCATTCACAAAGAAACCAGTTACAGGAATGACACTACTTCCCTGCCCCAAAAAGGAGCTCCAAAAGTAACTTCGGCTTTGTTATCTCCATCTAGACAATCAAAAACTTCGAAAGCTTTGTTGTCCTCGAAAATCTCATCTTCTCCGGCATCATTGAGTTCATTGGCTTCAAAGTCTATATCATACAAAGAAGTGGCTGTAGCACCACCAGGTACAGTTTTAAAGCCATTGTTGGAAAAAACTGAGGTAGAAAAGGTAAACGATGAAAATGAGACGCAGAAACAAGAAGCTTCTATTGAAAAATCTATAGCTGAAGCAGTTCAACAGCAAGATGAAAAAGAAGTAATTCATGATGAATCTGAAAAAGAAAGTTCTGCATCCGAACTCGAGAAGGTTTCCCTTTCATCTGATCAGACAAAACCTACAGAAACAAATGGAAGTAAGCTTTCAGCTGCAGCCAAACCATTCAGTCCAGGAACGTTGTCTGCGTCTCGCCATTTAAATCCCGTTCCCGTGGCAAGCATATATGATGCAAATGGGAGTCAAGGAATACTTGTGGAGCCTGTGCTTCCTCCTGCTGCTGCAAGGGTCCCTTGTGGTCCTCGATCACCATTGTATTACAGAACCAACTATACTTTCCGCATGAAACATGGATCATCGAAGATAAGGGAAATAAGTGGATCCGGCGGTCCAAGAATCATGAATCCACATGCTCCCGAGTTTGTTCCAAGAAGTGCCTCCCAAATAGAAACTAGTGATGCCAATTCAAATGTCTCCAGTGATGAAAATAAGAGCAGTCCTTCAAAACACAGTCTTTCGGAATCTGAGAAGTCAGAGATAGCAAGGCAGATATTGCTGAGTTTTCTAGTGAAATCTGTTCATCAAAATGCTGATGCTGTGGATGAGGCTAAAATTACTGAAGGAGAAGTTGAGGATTTGGAAAATTCTTCTGATGAAGTAGCTAAAGACAGTGCTGTCATAAAAATAACTTATGGAACTGATGAAAAGAACAAGACAGTGGTTAATTCCAGTGATGACGGTGAAGAGCAAGATAAATTAGACGGTGAAGGATTTGTAGTTGTAACAAACAGGAGAAAAAGCAGACAGAAAATCACAAACGGAGTTCCAGAATTGTACAATCAGCAGTCGATTTGTGCTTCGGTTCGTTGA 4893 0.4155 MAPKSGKGKTNKAKAEKKKKEEKAVAPSLVDITIVTPYDSQIVLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEVKGRRLNDKVEVVTLKPCVLRMVEENYYEEVQAVTHVRRLLDIIACTTRFGKPKRTITGPESKPKKNGKAQNQNKSSVSPPATPNGDSRVGLPSSDPPASPISDNVGMVAIHPTPKLSDFYEFFSFSHLTPPILHLKKCETKDEDDRRKGDYFQLQVKISNGKMIEVVASEKGFYSVGKLSLQSHTLVDLLQQLSRGFSNAYGSLMKAFSDRNKFGNLPYGLRSNTWLVPPSVGESLSNFPALPAEDENWGGNGGGQGRNRAYDLRPWATDFAILASLPSKTEEERVIRDRKAFLLHSQFVDTSIFKAAAAIQHVMESKSSKKNEMNSVLHQDQVGDLLIVVKHDGNGKFDSTLNEPSKQNEHVQKNLIKGLSADESVTVNDTSSLTVVVVNHCGYTATVKVVGNANAKKPKVQDIEIDDQPDGGANALNINSLRVLLHKSGAEFSEGTLTSLSNFDDLDASKDLVRKVVEEWTEKIKEEPSVSERSIRWELGSSWMQHLQKQETSTDVGSDNKNGNVEQAVKGLGNQFKFLKKREKKASELDGTDSREPNNDELSSSNELETLLSKEAFSRIKESGSGLHLKSVDELINMAHKFYDEVALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMGSLGEVVKLAENLPHIQSLCIHEMITRAFKHLLKAVIASVNNVADLPSVIASTLNFLLGGCRTEDTDQTSGDDHRLKIHWLRSFLSQRFGWTLKDEFQHLRKLSILRGLCHKVGLELFPRDYDMESPKPFGKYDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMAVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGAEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKTDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQRRPKILPISDNNGQEHDDAAAIADDGVLVDNVKDVKTTVEGNVNETNATHDSDEPKDIGGDLSRHKPVTSEAVYETSSDEGWQEANSKGRSGNGANRKSGRRQRPNLSKLSIHKETSYRNDTTSLPQKGAPKVTSALLSPSRQSKTSKALLSSKISSSPASLSSLASKSISYKEVAVAPPGTVLKPLLEKTEVEKVNDENETQKQEASIEKSIAEAVQQQDEKEVIHDESEKESSASELEKVSLSSDQTKPTETNGSKLSAAAKPFSPGTLSASRHLNPVPVASIYDANGSQGILVEPVLPPAAARVPCGPRSPLYYRTNYTFRMKHGSSKIREISGSGGPRIMNPHAPEFVPRSASQIETSDANSNVSSDENKSSPSKHSLSESEKSEIARQILLSFLVKSVHQNADAVDEAKITEGEVEDLENSSDEVAKDSAVIKITYGTDEKNKTVVNSSDDGEEQDKLDGEGFVVVTNRRKSRQKITNGVPELYNQQSICASVR 1630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02330 1630 Pfam Translation initiation factor eIF3 subunit 135 689 831 IPR033646 -
Car06g02330 1630 MobiDBLite consensus disorder prediction 1487 1517 - -
Car06g02330 1630 MobiDBLite consensus disorder prediction 1487 1507 - -
Car06g02330 1630 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1627 IPR027523 GO:0006996
Car06g02330 1630 SMART tpr_5 902 935 IPR019734 GO:0005515
Car06g02330 1630 SMART tpr_5 944 977 IPR019734 GO:0005515
Car06g02330 1630 SMART tpr_5 986 1019 IPR019734 GO:0005515
Car06g02330 1630 ProSiteProfiles TPR repeat profile. 902 935 IPR019734 GO:0005515
Car06g02330 1630 MobiDBLite consensus disorder prediction 1241 1289 - -
Car06g02330 1630 MobiDBLite consensus disorder prediction 1178 1195 - -
Car06g02330 1630 MobiDBLite consensus disorder prediction 616 636 - -
Car06g02330 1630 MobiDBLite consensus disorder prediction 1347 1369 - -
Car06g02330 1630 MobiDBLite consensus disorder prediction 1346 1394 - -
Car06g02330 1630 CDD CLU-central 691 832 IPR033646 -
Car06g02330 1630 MobiDBLite consensus disorder prediction 616 631 - -
Car06g02330 1630 MobiDBLite consensus disorder prediction 1 22 - -
Car06g02330 1630 Coils Coil 1537 1557 - -
Car06g02330 1630 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Car06g02330 1630 Gene3D Tetratricopeptide repeat domain 870 1108 IPR011990 GO:0005515
Car06g02330 1630 ProSiteProfiles Clueless (Clu) domain profile. 322 587 IPR025697 -
Car06g02330 1630 SUPERFAMILY TPR-like 939 1057 IPR011990 GO:0005515
Car06g02330 1630 MobiDBLite consensus disorder prediction 130 182 - -
Car06g02330 1630 MobiDBLite consensus disorder prediction 1115 1147 - -
Car06g02330 1630 MobiDBLite consensus disorder prediction 1201 1232 - -
Car06g02330 1630 MobiDBLite consensus disorder prediction 1370 1392 - -
Car06g02330 1630 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1627 - -
Car06g02330 1630 MobiDBLite consensus disorder prediction 141 166 - -
Car06g02330 1630 SUPERFAMILY TPR-like 868 971 IPR011990 GO:0005515
Car06g02330 1630 MobiDBLite consensus disorder prediction 1170 1289 - -
Car06g02330 1630 Pfam Tetratricopeptide repeat 901 971 - -
Car06g02330 1630 Pfam Tetratricopeptide repeat 985 1059 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02330 Car-Chr6 24996253 25010983 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02330 K03255 - gmx:100801625 2372.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02330 06 24996253 25010983 Car06g02330 06 24996253 25010983 ECH