Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02328 ATGTCGAAAGAAAATTTTTTCATTGGATCAATTGATCAAGGAACAAGCAGCACTAGGTTCGTCATCTATGACAAATCAGCTAAACAAATTGGATTTCATCAGGTTGAATTCACTCAGTTCTATCCAGAAGCAGGGTGGGTGGAGCATGATCCAGTGGAGATATTGGAGAGTGTGAAGGTTTGTATTGCTAAGGCAGTGGATAAGGCAACAGCTGATGGATTTAATGTGGATAAAGGGTTGAAGGCTATTGGTCTAACCAATCAAAGAGAGACCACTCTTCTTTGGAGCAAATCCACTGGTGTTCCTCTTCACAATGCTATTGTTTGGATGGATGCTCGTACTGCATCTATTTGCAGGAGACTGGAAAAGGAGTTATCGGGCGGTAGAACCCACTTCGTAGAGAGTTGCGGTTTGCCTATCAGCACATATTTCAGTGCTTTGAAACTTTTGTGGTTGATGGAAAATGTGGACCCTGTCAAGGAAGCTATAAAGAAAGGCGACGCCTTGTTTGGAACCATAGACACTTGGTTGATATGGAACTTAACCGGAGGTGTGAAAGGAGGATTGCATGTTACCGATGTTTCCAATGCATCCCGAACAATGCTGATGAATCTAAAAACCCTTGACTGGGACGCATCTACGTTGAAAACACTTAAAATCCCTCCTGAAATTTTGCCTAAAATCATCAGTAATTCAGAAGTTATAGGCAATGTCGCCTCTGGATGGCCAGTTGCTGGTATCCCTATCTCCGGATGTCTAGGGGATCAACATGCAGCCATGCTAGGACAAGCGTGCCGTAAAGGCGAAGCTAAAAGTACTTATGGCACAGGTGCTTTCATTCTGCTAAACACTGGTGAAGAAATTGTTCAATCTAAGCATGGCCTTCTATCAACTGTAGCCTTTAAGCTTGGCCCGAAAGCTCCAACCAATTATGCACTTGAAGGATCAGTTGCAATTGCTGGAGCTGCGGTGCAATGGCTGAGAGACAGTCTCGGTCTCATTTCTAGTGCTAAAGATATAGAGGCTCTTGCTTTAACGGTTGACTGCACCGGCGGAGTTTACTTTGTTCCCGCCTTTAATGGATTGTTTGCTCCATGGTGGCGTGATGATGCTCGAGGGGTTTGTATTGGAATAACAAGATATACCAGCAAGGCTCACATTGCTCGAGCCGTTCTTGAAAGCATATGTTTTCAAGTAAAGGATGTAATTGACTCGATGCACAAAGATTCTGGGATTGATGAAACCAAGAAAAGCGATTTTTTGCTCAGGGTTGACGGAGGAGCAACTGCTAACAACCTTTTGATGCAGATTCAGgcagatttgttagcaactccagtagttagaccagctgacatagagacaacagcACTTGGAGCAGCCTATGCAGCCGGATTAGCCATCGGGGTTTGGAAAGAAGATTATGTTTTCGACTGTAGAGAAAAACTGAAGGACGCTGGCGTTTTCAGTCCGGTAATGGCCGCGGATGTGAGGAAAAAGAAAACAGACTCTTGGAGCAAAGCTGTTGGTAGATCTTTTGACTTAGCAGATCTTACTCTTTGA 1560 0.4256 MSKENFFIGSIDQGTSSTRFVIYDKSAKQIGFHQVEFTQFYPEAGWVEHDPVEILESVKVCIAKAVDKATADGFNVDKGLKAIGLTNQRETTLLWSKSTGVPLHNAIVWMDARTASICRRLEKELSGGRTHFVESCGLPISTYFSALKLLWLMENVDPVKEAIKKGDALFGTIDTWLIWNLTGGVKGGLHVTDVSNASRTMLMNLKTLDWDASTLKTLKIPPEILPKIISNSEVIGNVASGWPVAGIPISGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEEIVQSKHGLLSTVAFKLGPKAPTNYALEGSVAIAGAAVQWLRDSLGLISSAKDIEALALTVDCTGGVYFVPAFNGLFAPWWRDDARGVCIGITRYTSKAHIARAVLESICFQVKDVIDSMHKDSGIDETKKSDFLLRVDGGATANNLLMQIQADLLATPVVRPADIETTALGAAYAAGLAIGVWKEDYVFDCREKLKDAGVFSPVMAADVRKKKTDSWSKAVGRSFDLADLTL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02328 519 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 143 155 IPR018483 GO:0005975|GO:0016773
Car06g02328 519 Gene3D - 264 513 - -
Car06g02328 519 SUPERFAMILY Actin-like ATPase domain 265 512 IPR043129 -
Car06g02328 519 TIGRFAM glycerol_kin: glycerol kinase 7 512 IPR005999 GO:0004370|GO:0006072
Car06g02328 519 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 262 IPR018484 GO:0005975|GO:0016773
Car06g02328 519 PANTHER SUGAR KINASE 2 515 - -
Car06g02328 519 PANTHER - 2 515 - -
Car06g02328 519 PIRSF GlpK 5 518 IPR000577 GO:0005975|GO:0016301
Car06g02328 519 SUPERFAMILY Actin-like ATPase domain 8 265 IPR043129 -
Car06g02328 519 Gene3D - 2 262 - -
Car06g02328 519 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 466 IPR018485 GO:0005975|GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02328 Car-Chr6 24959037 24962981 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02328 K00864 - gmx:547750 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02328 06 24959037 24962981 Car06g02328 06 24959037 24962981 ECH