Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02325 ATGGGTGGAGCGTGTTCCAGGAAGCAAGAGCGGAATAATGAAGATGGTCTTTGTAGAGGATTTTCAAGGAAATTTTGCAAATGTGGGAGTTTGAAATGGTGGACGTCGTCATTTTCTTATTCATCCATGGATTTACGCATACAAAAAGGAGAATGTCCATCACTGTTGGACTTGTGCATCCAGAAAATAAGTGAGGATCTTGATAGACATAACACATTTTCTATGCTTCCACGGGATATAAGTCAGCAAATTTTTAATAATTTGGTCTACTCTCAACGTCTTACTAGAGGTTCTCTTGAAACCTTTCGAGATTGTGCTCTCCAGGATCTATACTTGGGAGAATATGCTGGTGTTGATGATTCTTGGATGGATGTCATCTCATCTCAGGGTTCATCTTTACTTTCGGTAGATCTTTCTGGGTCTGATGTCACTGATTTTGGATTGACTTACCTTAAAGATTGTCAAAGTCTCATTTCCTTAAATCTAAATTACTGTGACCAAATTTCAGATCATGGAGTGGAGTGTATCAGTGGTCTGTCAAACTTGACAAATTTGAGTTTTAGAAGAAATGATTCATTATCTTCTCAAGGAATGAGTGCCTTTTCTGGTCTTGTTAACTTGGCCAAGTTGGATTTGGAGAGATGTCCTGGGATTCATGGAGGCATTGTTCATCTTCAAGGTTTAACTAAGTTGAAATCTCTCAATATGAAGTGGTGTAATTGCATAACAGATTCGGACATGAAGCCTCTATCAGAACTTGCAAGCTTGACAAGTCTAGAGATTTCTTGTAGTAAAGTCACCGATTTTGGCATCAGCTTTCTAAGAGGATTACAGAAGCTTGCCCTGTTAAATTTGGAAGGGTGCCTTGTAACATCTGCATGCTTGGATTCTCTTGCAGAGCTTCCTGCACTGTCAAACTTGAATCTTAATAGATGCAATCTTTCTGACAATGGATGTGAAAAGTTTTCAAGACTGGAAAATTTGAAAGTGTTAAACTTGGGATTTAATGACATCGGAGATACATGTTTAGCTCATTTGAAAGGGTTGACGAAGTTGGAGAGCTTGAACCTTGATTCATGTAAGATTGGTGATGAAGGATTGGTGAACTTGACAGGTCATAAGCATTTGATCTGCTTGGAATTGTCTGATACAGAAGTTGGAAACAATGGGCTAGAGCATTTATCTGGATTGTCTAGTCTGGAGAAAATAAATCTGTCCTTTACTGTTGTTAGTGATAGTGGTTTAAGGAAATTGTGTGGAATCTCATCTCTGAAGTCGCTTAATTTGGATGCTTACCAAATTACTGATGCTGGACTGGCAACCCTTACAAGTTTGACTGGACTCACTGACCTGGATTTGTTTGGTGCTCGGATAACAGATGTTGGGACAAATTATTTGAAAAAATTCAAGAACCTGAGGTCCTTGGAAATATGCAGTGGTGGATTGACTGATGCTGGTGTGAAAAATATCAAAGAGCTTTCTTCGCTAATGTGCTTAAATTTATCACAAAACAGCCACCTTACGGACAAAACACTGGAGTTAATTGCAGGGCTCACTGGGTTGATTTCTTTAAATCTTTCAAAGTCTCGCATCACCACAGCTGGACTGCAGCATTTGAAAACACTGAAGAACTTGAGATCTCTGACATTGGAGTCCTGTAAGGTGACATCAAATGACATAAAGAAATTTAGATCAATACACCTCCCAAATTTGGTAAGCTTTCGACCCGAGTAG 1734 0.3904 MGGACSRKQERNNEDGLCRGFSRKFCKCGSLKWWTSSFSYSSMDLRIQKGECPSLLDLCIQKISEDLDRHNTFSMLPRDISQQIFNNLVYSQRLTRGSLETFRDCALQDLYLGEYAGVDDSWMDVISSQGSSLLSVDLSGSDVTDFGLTYLKDCQSLISLNLNYCDQISDHGVECISGLSNLTNLSFRRNDSLSSQGMSAFSGLVNLAKLDLERCPGIHGGIVHLQGLTKLKSLNMKWCNCITDSDMKPLSELASLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTSACLDSLAELPALSNLNLNRCNLSDNGCEKFSRLENLKVLNLGFNDIGDTCLAHLKGLTKLESLNLDSCKIGDEGLVNLTGHKHLICLELSDTEVGNNGLEHLSGLSSLEKINLSFTVVSDSGLRKLCGISSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNSHLTDKTLELIAGLTGLISLNLSKSRITTAGLQHLKTLKNLRSLTLESCKVTSNDIKKFRSIHLPNLVSFRPE 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02325 577 SUPERFAMILY L domain-like 130 339 - -
Car06g02325 577 Gene3D Ribonuclease Inhibitor 88 219 IPR032675 -
Car06g02325 577 Gene3D Ribonuclease Inhibitor 480 572 IPR032675 -
Car06g02325 577 Gene3D Ribonuclease Inhibitor 374 479 IPR032675 -
Car06g02325 577 Gene3D Ribonuclease Inhibitor 220 299 IPR032675 -
Car06g02325 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 2 534 - -
Car06g02325 577 SMART LRR_CC_2 422 445 IPR006553 -
Car06g02325 577 SMART LRR_CC_2 542 566 IPR006553 -
Car06g02325 577 SMART LRR_CC_2 301 325 IPR006553 -
Car06g02325 577 SMART LRR_CC_2 397 421 IPR006553 -
Car06g02325 577 SMART LRR_CC_2 493 518 IPR006553 -
Car06g02325 577 SMART LRR_CC_2 228 253 IPR006553 -
Car06g02325 577 SMART LRR_CC_2 349 373 IPR006553 -
Car06g02325 577 SMART LRR_CC_2 154 179 IPR006553 -
Car06g02325 577 Pfam BspA type Leucine rich repeat region (6 copies) 132 212 IPR026906 -
Car06g02325 577 Pfam Leucine rich repeat 302 362 IPR001611 GO:0005515
Car06g02325 577 Pfam Leucine Rich repeat 374 395 IPR001611 GO:0005515
Car06g02325 577 Pfam Leucine Rich repeat 229 251 IPR001611 GO:0005515
Car06g02325 577 Pfam Leucine Rich repeat 398 419 IPR001611 GO:0005515
Car06g02325 577 SUPERFAMILY RNI-like 272 566 - -
Car06g02325 577 Gene3D Ribonuclease Inhibitor 300 373 IPR032675 -
Car06g02325 577 PANTHER UNCHARACTERIZED 2 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02325 Car-Chr6 24933858 24942039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02325 153 508 Receptor kinase-like Gene Family AT1G75820 25.556 5.81e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02325 - - gmx:100795219 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02325 06 24933858 24942039 Car06g02325 06 24933858 24942039 ECH