Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car06g02323 | ATGGATTGGTACTCATGGCTTTCAAAAACAAACCTTGATCCATCTCTTGTGTATGAGTATGGCCTAACTTTTTCACACAATGAACTAGAAGAAGAAGACATAGTTTACTTCAACCATGAATTTCTCCAAAGCATGGGAATCTCCATAGCCAAACATAGGCTAGAAATTCTCAAACTTTCAAGAAAAGAAAAAGGTAATAAGAGGCAACAAAGACCAATGGCAAAACTCATAGTAGCAATCAAAAGGACAAAAAGGTCATTAGCTAACTACATAAGGAGAACATTGGTTACATGTGAAGAATCAAATTCAGCACTTGTTGTTGTTCCAACATCAAGGGCTAGCAATTATTATGGAACAACAAGATCATGGAAGAGGAGTAATAAGAAAATGAAAGTGGCTAAACAAGAGAGGTTATTGCTTACAAATGGAAGTCCTAGTCCTACAATTATGCCTGCTCTTGCTCTTGATAGTTTTTCTAGTCCTATGGTGTATCATTTTCATGAGGGAAAGATTAAAAGAgatggtgatgatgatgataatgGTTATTGGTCAGCTGCTGTTGAAGATATTAGGTGGGATACTATGTTCCATGATCTAAAGCCAAATTAA | 609 | 0.3465 | MDWYSWLSKTNLDPSLVYEYGLTFSHNELEEEDIVYFNHEFLQSMGISIAKHRLEILKLSRKEKGNKRQQRPMAKLIVAIKRTKRSLANYIRRTLVTCEESNSALVVVPTSRASNYYGTTRSWKRSNKKMKVAKQERLLLTNGSPSPTIMPALALDSFSSPMVYHFHEGKIKRDGDDDDNGYWSAAVEDIRWDTMFHDLKPN | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car06g02323 | 202 | CDD | SAM_superfamily | 2 | 62 | - | - | |
| Car06g02323 | 202 | Pfam | SAM domain (Sterile alpha motif) | 23 | 58 | IPR001660 | GO:0005515 | |
| Car06g02323 | 202 | Gene3D | - | 1 | 70 | IPR013761 | - | |
| Car06g02323 | 202 | PANTHER | OSJNBA0033G05.11 PROTEIN | 1 | 202 | - | - | |
| Car06g02323 | 202 | SUPERFAMILY | SAM/Pointed domain | 5 | 64 | IPR013761 | - | |
| Car06g02323 | 202 | PANTHER | OSJNBA0033G05.11 PROTEIN | 1 | 202 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car06g02323 | Car-Chr6 | 24875381 | 24876890 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car06g02323 | - | - | pvu:PHAVU_010G157800g | 259.61 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car06g02323 | 06 | 24875381 | 24876890 | Car06g02323 | 06 | 24875381 | 24876890 | ECH | |
| Car01g02881 | 01 | 53894336 | 53895719 | Car06g02323 | 06 | 24875381 | 24876890 | PCT |