Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02322 ATGATAAATCTTTCTGATAATTCACATTTGATGGATTCCAATAATTGGAGACCTAATCCGGGTACTGAACCCACTATTGACACAAGTGAGTGGAGAGCTCAATTGCAACCTGATTCACGCCAAAGAATTGTCAACAAAATAATGGACACATCAAAAAAACATCTTCCCGTTTCTGGTTCTGAGGGATTACTTGAACTTTGGAAGATTGCTCAAAGGTTTGAAGAGAAGATTTTTACTGCCGCAACAAGCCAGTCTGATTATCTACGGAAAATATCTATGAAAATGCTTACGATGGAGACTAAATCTCAAAGCTCCATTGCCAACAATATGCCTTCAAATGAAGGTGGTCCTAGCAACAAACCGCCCGATCAAGATAATTCACATTTGATGGATTCCAATAATTGGAGACCTAATCCGGGTACTGAACCCACTATTGACACAAGTGAGTGGAGAGCTCAATTGCAACCTGATTCACGCCAAAGAATTGTCAACAAAATAATGGACACATTAAAAAAACATCTTCCCGTTTCTGGTTCTGAGGGATTACTTGAACTTTGGAAGATTGCTCAAAGGTTTGAAGAGAAGATTTTTACTGCCGCAACAAGCCAGTCTGATTATCTACGGAAAATATCTATGAAAATGCTTACGATGGAGACTAAATCTCAAAGCTCCATTGCCAACAATATGCCTTCAAATGAAGGTGGTCCTAGCAACAAACCGCCCGATCAAGATAATTCACATTTGATGGATTCCAATAATTGGAGACCTAATCCGGGTACTGAACCCACTATTGACACAAGTGAGTGGAGAGCTCAATTGCAACCTGATTCACGCCAAAGAATTGTCAACAAAATAATGGACACATTAAAAAAACATCTTCCCGTTTCTGGTTCTGAGGGATTACTTGAACTTTGGAAGATTGCTCAAAGGTTTGAAGAGAAGATTTTTACTGCCGCAACAAGCCAGTCTGATTATCTACGGAAAATATCTATGAAAATGCTTACGATGGAGACTAAATCTCAAAGCTCCATTGCCAACAATATGCCTTCAAATGAAGGTGGTCCTAGCAACAAACCGCCCGATCAAGGATTTGTTTTACAGTCTCAAGCTCTTAATCAAGGTCAGCAACATCCTAATCCTTTGCCTAGTCAGCACCAGCCTCGTCAGCAGCTTCTATCTCAGACCATTCAAAATAATGTTGCACCTCAACCTAACCTGCCCTCGGTATCCAGTTTATCGCAGAATTCTGGTCAGAATATTAACCAAAATTCCAACACACAACCTGGGCAGAATTCCGCAGGGAACACTATTGGCCATAATTCCAATGTACAAAGTATGTTTTCTGGTTCTCAGAGACAAATGCCAGGAAGGCAACAGGTTGTTCCCCAACAGCAACAGCAATCACAGAATCAACAACATATTCTTTATCCACAGCAGCTTCTGAAGCAAAAGTTTCAGATGTCTCAGATgcagcagcagcagcaacagcagAATCTTCTGCAACCAAATCAGTTGCAATCATCTCAGCAATCTGTTATGCAGCCTTCAATGTTGCAATCATCTCTATCTAGTCTCCCGCAGAATCAGCAGTCTAACAATGTTCAACAGTCAACACAGTCCAGGCTTCAGCAACATTCCCAAATTATTCGGcagcaacagttacagcaacagaattctattgctcatcagcaacaaacaccaatggctcaacaacagcagcagcaacagcTTGTGGGGACTCAGTCAAATGCAACGAATGGGCCACATGCTCAGTTGCTTGGGCAACAGAACAATGTTGGGGATACACAGAAATCCCAGAGGTTGCTTTCTCAGCAGAATAATCTCATGAATCTGCAACAGCGGCAGCAGTTAATGAATCAGCAAAACAATCTAACAAATATACATCAACAACAGTTGGGAAATAATGTACCAGGGTCGCAACAGCAGCAACAACTATTTGGAACAGAGTCTGGCAACCAAGGCATCCAAACAAGCCATCATTCTGCACACATGCTGCAACAATCAAAGGTTTCAATGCAGCAACAATTACAACAAAATGCATCAAAGTTGTTGCCGTCTCACTTGCAGCAGTCCCAGCCACAGGCTTCACAGCAGCAGTTAATGTCGCAGATTCACAATCAGCCTACGCAGATGCAACAGCAACTGGGTTTGCAACAGCAGCCAAATACCTTGCAACGAGATATGCAGCAAAAACTTCAAGCATCAGGGTCCTTACTTCAACAGCAAAGTGTTCTTGATCAGCAAAAACAATTATACCAATCTCAAAGAGCTCTTCCAGAAACATCAACAACTTCTGTGGATTCTACAACACAGACTGGACAACCAAGTGGGGTTGATTGGCAAGAAGAAGTTTATCAAAAGATGCAAACTATGAAAGAAAACTATTTGCCAGATATGAATGAAATGTGCCAGAAAATTTCTCTGAGACTTCAGCAGCATGATTCTAATCCTCAACAACCAAAGTCAGATCAGATTGAAAAACTGAGGGCATATAAAATGATGTTGGAACGCATGATAGCAATCCTACAGATTCCGAAGAACAGCATTTTGCCTAGTTTCAGGGAAAAATTAGGATCATATGAGAAGCAGATCGTAAATCTCATAAATTCAATTAGGCCTAGGAGAAGCGGGTCTTCACTGCAACCAGGACAGCTTCCCCCAACTCATGTTCCCTCCATGCAACAGTCACAATCTCAAGTTACTCCAGTACAGTCTCATGAAAACCAAATGAACTCTCAGTTGCAGCCATCAAATTTACAGGGTTCTGCAGCAACAATACAGCAGAACAATATTGCGAGTTTGCAGCACAACTCTATGTCTGGTTTACCAACAGGACAACAAAATATGTTGAATTCAATTCAACCTAGTACTAATTTAGATTCTGGACAAGGAAATTCCGTGAACTCTCTGCAACAGGTTCCAGTGAGCTCCCTTCAACAAAAAGCTGGTAGTACTCCTCAACAAACCAACATCAATTCATTACCATCACAAGGTGGGGTAAATCAGCGACAATTGTTGCAGAGGCAGCAAATCCTAcagcagcagcagcagctacaccagccagcaaagcaacagctgtctgcacaactgcagACACATCAAATGCCTCAGGTTAACCAAATGAGTGATATAAATGATATGAAAATGCGACAAGGAATGAGTGTTAAACCAGGGGTATTTCAGCCACATCTTACATCAGGTCAAAACTCAGCTTATTCCCATCCACAGTTGAAACAAGGGGGTCCATTTCAGGGTTCTTCACCCCAACTCCTTCAGGATGCGTCTCCTCAAATTATGCAACATTCATCTCCCCAAGTTGACCAACAAACTCATCTCCCGTCGCTGACAAAAGTTGCAACTCCTCTGCAATCTTCTAATTCACCTTTTATTGTCCCAACCCCGTCACCTCCCATGGCTCCGTCACCTATGCTAGGAGATTCTGACAAGTCCATTCCTGGTGTTTCATCATCAAATGCAGCCAATGCTGGACAACATACAGGGGGTGCAGCAGCACCAGCTCAATCCCTTGCCATTGGGACTCCTGGGATATCAGCATCTCCTTTATTGGCAGAATTCAGTGGCCCAGATGGTGCTTATGGTAATGCTTTAGCAGCTACTTCTGGGAAGTCAACTGCAGAGCAGCCTCTTGAGCGCCTAGTCAGAGCGGTGCAATCAATGTCAACTAAAACATTAAGTGCCGCTGTCAATGATATTAGTTCAGTTGTCAGCATGACTGATAGGATAGCAGGATCAGCTCCAGGTAATGGATCCAGAGCAGCTGTTGGTGAAGATTTGGTTTCCATAACTAATTGTCGTCTTCAGGCTAGAAATTTTACTACTCAAGATGGGAGTAATGGAACCAAGAAGATAAAGCGCTACATCAGTTCTAGACCCTTAAAAAATGTGTCATCTGCTGGAAGCATGAATGATAGTATCAATCAATTTTCTGCTTCAGAGGCTTCTCAACAGAAGTCAACTGCATCCTCTAATTTCACGAAGCCAAAGGCTGAGGTTAGTCATGCCCTTTTGGAAGAAATACGGCAAATTAATTGCCGACTTATTGACACAGTAGTAGACATATGTGATGAGGATGTTGATCCAACTATAGCTTCTGTTACTGCTGCCGAAGGTGCAGAAGGGACCATCGTCAAATGTTCTTTCATTCCTGTGGCTCTCAGCCCATCTTTAAAATGTCACTATGCTTCACTACAGTCACCTATTCAGCCCCTGCGTTTGCTGGTCCCTCAAAATTATCCTAATTGTTCTCCCATATTCCTAGACAAGCTTCCGGTTGAATCCTGTAAGGGGAATGCAGATCTTACAGAGAAAGCAAAGTTAAAGTTCAGCGTAGCCTTACGTAGTGTGTCACAACCTTTTTCCGTTAAGGATATAGCAAAGACTTGGGATAGTTCTGCTCGCGGCGCTGTTTCTGATTATGCGCAACAATTTGGTGGAGGAACCTTCAGCTCTAAATATGGAACTTGGGAGGATTGTTTGGCTGCATGA 4527 0.4076 MINLSDNSHLMDSNNWRPNPGTEPTIDTSEWRAQLQPDSRQRIVNKIMDTSKKHLPVSGSEGLLELWKIAQRFEEKIFTAATSQSDYLRKISMKMLTMETKSQSSIANNMPSNEGGPSNKPPDQDNSHLMDSNNWRPNPGTEPTIDTSEWRAQLQPDSRQRIVNKIMDTLKKHLPVSGSEGLLELWKIAQRFEEKIFTAATSQSDYLRKISMKMLTMETKSQSSIANNMPSNEGGPSNKPPDQDNSHLMDSNNWRPNPGTEPTIDTSEWRAQLQPDSRQRIVNKIMDTLKKHLPVSGSEGLLELWKIAQRFEEKIFTAATSQSDYLRKISMKMLTMETKSQSSIANNMPSNEGGPSNKPPDQGFVLQSQALNQGQQHPNPLPSQHQPRQQLLSQTIQNNVAPQPNLPSVSSLSQNSGQNINQNSNTQPGQNSAGNTIGHNSNVQSMFSGSQRQMPGRQQVVPQQQQQSQNQQHILYPQQLLKQKFQMSQMQQQQQQQNLLQPNQLQSSQQSVMQPSMLQSSLSSLPQNQQSNNVQQSTQSRLQQHSQIIRQQQLQQQNSIAHQQQTPMAQQQQQQQLVGTQSNATNGPHAQLLGQQNNVGDTQKSQRLLSQQNNLMNLQQRQQLMNQQNNLTNIHQQQLGNNVPGSQQQQQLFGTESGNQGIQTSHHSAHMLQQSKVSMQQQLQQNASKLLPSHLQQSQPQASQQQLMSQIHNQPTQMQQQLGLQQQPNTLQRDMQQKLQASGSLLQQQSVLDQQKQLYQSQRALPETSTTSVDSTTQTGQPSGVDWQEEVYQKMQTMKENYLPDMNEMCQKISLRLQQHDSNPQQPKSDQIEKLRAYKMMLERMIAILQIPKNSILPSFREKLGSYEKQIVNLINSIRPRRSGSSLQPGQLPPTHVPSMQQSQSQVTPVQSHENQMNSQLQPSNLQGSAATIQQNNIASLQHNSMSGLPTGQQNMLNSIQPSTNLDSGQGNSVNSLQQVPVSSLQQKAGSTPQQTNINSLPSQGGVNQRQLLQRQQILQQQQQLHQPAKQQLSAQLQTHQMPQVNQMSDINDMKMRQGMSVKPGVFQPHLTSGQNSAYSHPQLKQGGPFQGSSPQLLQDASPQIMQHSSPQVDQQTHLPSLTKVATPLQSSNSPFIVPTPSPPMAPSPMLGDSDKSIPGVSSSNAANAGQHTGGAAAPAQSLAIGTPGISASPLLAEFSGPDGAYGNALAATSGKSTAEQPLERLVRAVQSMSTKTLSAAVNDISSVVSMTDRIAGSAPGNGSRAAVGEDLVSITNCRLQARNFTTQDGSNGTKKIKRYISSRPLKNVSSAGSMNDSINQFSASEASQQKSTASSNFTKPKAEVSHALLEEIRQINCRLIDTVVDICDEDVDPTIASVTAAEGAEGTIVKCSFIPVALSPSLKCHYASLQSPIQPLRLLVPQNYPNCSPIFLDKLPVESCKGNADLTEKAKLKFSVALRSVSQPFSVKDIAKTWDSSARGAVSDYAQQFGGGTFSSKYGTWEDCLAA 1508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02322 1508 Coils Coil 608 628 - -
Car06g02322 1508 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 1053 1508 - -
Car06g02322 1508 MobiDBLite consensus disorder prediction 943 1007 - -
Car06g02322 1508 MobiDBLite consensus disorder prediction 493 595 - -
Car06g02322 1508 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 249 990 - -
Car06g02322 1508 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 11 125 - -
Car06g02322 1508 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 130 244 - -
Car06g02322 1508 MobiDBLite consensus disorder prediction 219 275 - -
Car06g02322 1508 Pfam KIX domain 267 346 IPR036546 -
Car06g02322 1508 Pfam KIX domain 148 227 IPR036546 -
Car06g02322 1508 Pfam KIX domain 29 108 IPR036546 -
Car06g02322 1508 Gene3D Coactivator CBP, KIX domain 268 346 IPR036529 GO:0003712|GO:0006355
Car06g02322 1508 Gene3D Coactivator CBP, KIX domain 30 108 IPR036529 GO:0003712|GO:0006355
Car06g02322 1508 Gene3D Coactivator CBP, KIX domain 149 227 IPR036529 GO:0003712|GO:0006355
Car06g02322 1508 MobiDBLite consensus disorder prediction 100 156 - -
Car06g02322 1508 MobiDBLite consensus disorder prediction 338 364 - -
Car06g02322 1508 MobiDBLite consensus disorder prediction 762 787 - -
Car06g02322 1508 SUPERFAMILY Kix domain of CBP (creb binding protein) 266 341 IPR036529 GO:0003712|GO:0006355
Car06g02322 1508 SUPERFAMILY Kix domain of CBP (creb binding protein) 147 222 IPR036529 GO:0003712|GO:0006355
Car06g02322 1508 MobiDBLite consensus disorder prediction 638 738 - -
Car06g02322 1508 MobiDBLite consensus disorder prediction 1157 1171 - -
Car06g02322 1508 MobiDBLite consensus disorder prediction 400 471 - -
Car06g02322 1508 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 11 125 IPR044661 GO:0003713|GO:0031490
Car06g02322 1508 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 1053 1508 IPR044661 GO:0003713|GO:0031490
Car06g02322 1508 SUPERFAMILY Kix domain of CBP (creb binding protein) 28 103 IPR036529 GO:0003712|GO:0006355
Car06g02322 1508 MobiDBLite consensus disorder prediction 762 786 - -
Car06g02322 1508 MobiDBLite consensus disorder prediction 1130 1175 - -
Car06g02322 1508 MobiDBLite consensus disorder prediction 1070 1117 - -
Car06g02322 1508 MobiDBLite consensus disorder prediction 880 930 - -
Car06g02322 1508 MobiDBLite consensus disorder prediction 1 29 - -
Car06g02322 1508 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 249 990 IPR044661 GO:0003713|GO:0031490
Car06g02322 1508 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 130 244 IPR044661 GO:0003713|GO:0031490
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02322 Car-Chr6 24834381 24873828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02322 K14972 - gmx:100805336 1428.31