Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02316 ATGGCGCTTCTTCTCCGCCTGAAAACAACAAGACCAAAAACCACCAACACTCTCACTAATCCACCTTCTCTCCACCACCTCTTCTCCACCTCCAACACCGGCGGCGACGGCGGCGATAAACCTCCTTCCGATTCCATCCCGTCCTTTTCCTTTTCTGACTCTTTTAGAGATCTCAAAAGCTCCCTCAAACAAAAACCAACCTCGAAACCAGTCTCTTCTCTGTTATCTTCTTCAAATCCTCAAGAGCATTCTTTGAGCGGTGAAATCATGAAGAACATCCAGGGTTTCCGTAACCGAACAGCTGTTCCAATTCCCGAGAATCAGAAGAAGCCAATCTCGTTTCAGGAGATTTACAGCAAAATTCAGAATCGTCCTGGCGAATCCGCCGGGAATACCAGTTCGAAACCCTCGAAATCCCCAGGCGGCGGCATCGGAGAAGGAAATTTCGACGCGATTCGCGGAAGCCTAAGTCAGTTGAAAGGAACAATTGCAAATCCTTCATTACCGAAATGGAGACCTTCACCGAGTTCGAAGGTGATCGGTGGGACGAATCCTTTGCCAGAGTCGGTTTTCGGAAAGGAGGCGAGGGAAAGAATATCAAGGGAACTTGGTGGTTCGGCGAATTTGTTGAATTTGCCAGTTAGGTCATATATGCACAATGAATTGGGTGAGAAGTTGAAGAAATTGAGACCTCAGGTGAAAGGAAAAGAATGGTTTTCTATTGCTGAATTGAATGAGAGGTTAATGAAAGTGAGGGAAATGGATGAAATTGAAGCTAAGTCCAAATCTGATCTCGGATCGGTATTAAACTCGTGTTTGAGTAGTAGTCTAGCATATATTCAAAATCAAGAGGAGGACAACTCAAAGAAAGCTTCAATGCAAAGAATTGATATGTTGTCCTTGATGGGTGGGACTCCAACGTACTTGACAAAGCCTCCTAAAGAACATCTTGTTGAAAAGTATTTTCATCCAGATAACATGTCCTCCGCTGAAAAGTTGAAAATTGAACTCACAAAGGTCAGAGATGAATTTAAAATGTCCGAGTCAGATTGTGGCTCTGCTCGTGTTCAAGTTGCGCAACTCACAACCAAGATTAAGCATTTATCATCAGTTCTACACAAGAAGGATGTGCATTCTCGAAAAGGCCTGATTGCAATGGTTCAAAAGAGGAAAAAATTGCTGAAATACCTCAGAAGAACCGACTGGGATTCATATTGTTTTGTTATCTCTAAGCTAGGTCTACGTGATAATCCAGAACATACTTATAAATCTAGGACCGGTAAATCGGGTGAAGTAGCCAATTAA 1305 0.4322 MALLLRLKTTRPKTTNTLTNPPSLHHLFSTSNTGGDGGDKPPSDSIPSFSFSDSFRDLKSSLKQKPTSKPVSSLLSSSNPQEHSLSGEIMKNIQGFRNRTAVPIPENQKKPISFQEIYSKIQNRPGESAGNTSSKPSKSPGGGIGEGNFDAIRGSLSQLKGTIANPSLPKWRPSPSSKVIGGTNPLPESVFGKEARERISRELGGSANLLNLPVRSYMHNELGEKLKKLRPQVKGKEWFSIAELNERLMKVREMDEIEAKSKSDLGSVLNSCLSSSLAYIQNQEEDNSKKASMQRIDMLSLMGGTPTYLTKPPKEHLVEKYFHPDNMSSAEKLKIELTKVRDEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDVHSRKGLIAMVQKRKKLLKYLRRTDWDSYCFVISKLGLRDNPEHTYKSRTGKSGEVAN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02316 434 MobiDBLite consensus disorder prediction 163 183 - -
Car06g02316 434 MobiDBLite consensus disorder prediction 9 38 - -
Car06g02316 434 SMART Ribosomal_S15_2 337 415 IPR000589 GO:0003735|GO:0005840|GO:0006412
Car06g02316 434 MobiDBLite consensus disorder prediction 124 150 - -
Car06g02316 434 CDD Ribosomal_S15p_S13e 336 413 IPR000589 GO:0003735|GO:0005840|GO:0006412
Car06g02316 434 Coils Coil 330 350 - -
Car06g02316 434 MobiDBLite consensus disorder prediction 163 189 - -
Car06g02316 434 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 432 - -
Car06g02316 434 Gene3D - 333 380 - -
Car06g02316 434 MobiDBLite consensus disorder prediction 124 139 - -
Car06g02316 434 Gene3D - 382 417 - -
Car06g02316 434 MobiDBLite consensus disorder prediction 64 86 - -
Car06g02316 434 Hamap 30S ribosomal protein S15 [rpsO]. 327 416 IPR005290 GO:0003735|GO:0005840|GO:0006412
Car06g02316 434 MobiDBLite consensus disorder prediction 1 86 - -
Car06g02316 434 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 432 - -
Car06g02316 434 TIGRFAM S15_bact: ribosomal protein uS15 338 415 IPR005290 GO:0003735|GO:0005840|GO:0006412
Car06g02316 434 SUPERFAMILY S15/NS1 RNA-binding domain 337 416 IPR009068 -
Car06g02316 434 Pfam Ribosomal protein S15 339 415 IPR000589 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02316 - - cam:101488736 758.444