Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02306 ATGATTTATGCCAACCTAACAAGCAAAAGGCCTTCTAGAGTTTCATGCTTTGAACAGATCAATATGTCAGTGAAATATTTTCCTGAAAAATGCTGGGAATTGGTCTTTAGATTCCTTGGTCAAGGACATGATTTGGAGTCTGTTTCTATGGCCTGCAAGAAGTTCATTCCCATTACAAACCGGGTTAAATTTTCTCTAACACTACATGATCGAACAGTTCTATTCCTTCCTCGGCTACTCTCGAGGTTTTTATGGCTCAAAGTCATAGACCTCAGTTACTTCAATGGTGAACTAAAAGGCTTGCTTCATCAAATTTCACAATCTGAGTTAGACCTTGATTTGGTTAATCTTTCCAACCAAAGAACACTTCCTATTGATGAGTTGCGAGAACTTGGTTCAAAGATGGTAAATTTGAAGGCTTTGATTTGCTCAAACATTGGTTATTTGCATGATAGTCATCTAGTATTGATAGCTTATTGTTTCCCATTTCTTGAAGAGCTTGACATTAGCTTTCCATTGGATTCTCAAGCATCCGATTTCGGGATAGTACGACTATCTTCCATGCTTGAGAATATACGCAAGATCGATCTTTCCGGTAATCACTTGATCACTGATAAATCACTTATGTCTCTATGCCAGAACTGCAGATCAATGGAAGAAATTTCATTCTTCAAATGTTTTAAGATGTCCCAAATTGGCATTGTTTCCGCAATCCGAATGAGACCAGGTTTGGCTTCCATTTCTTTTAACATTGAAAAGAAAAGAATACATGGTCCTGGTTTGACACCCCTACACATTAACTTGGATTTGATTGATTCATTAACAACCTTGAAAAGATTAAACACAATTGATTTGTCAAACTCTTTTATCTCGGACGAGTTTCTTATATCAGTTGCAGATGGTTCGAGCGTGTTTCTTAAGAAGCTTGTTCTCCAAGACTGTTGCAACTTTACATTTTCAGGAATCTTTTATGTGTTATCCAAATGTCAATATGTCCAATGCTTAGATCTTCGAAAAGCCGACTTTCTAACCGATGAATCTATCAGCAAGTTATCTACATTTCTTCTTAACTTGACATCTATAGACCTTGGTGGTTGTTGTCAGCTGACGAATTCAACCTTTTTCATACTCACAAGAAACTGTCCTTTTCTCAGCGATATCAAAATGGAGAGAACATATATTGGAGTACAAGGCGAGGAAGATTCCAATTCCATGTTTAATTTTGCTATCAACCATCAAGTGAAAACAGTTTATTTGGGTGATAATATTTTACTCAAAGATGCAAGTTTAATAAAATTTTCTTTCATTTGTCCAAGTTTACAACTTCTTGACTTAAATGCTTGTGAGGGTATATCTGGAGAATCCCTTGTTGAGGTTATGAAGAGATGCTGTGAGATAAGGCATTTAAACCTTGCCAATACAATAATTAAAAGGTTTGAGATAAACTTTGAAGTTTCAAAATTGGGGATGTTGAATTTGTCAGGGTCAAGAATTGAAGATGAAGCACTCTCAATAATCTCAAAGTGGTGCAGCGGACTATTGCTTCTAGATATCCAAAATTGTTATGTTACGGCTAAGGGGGTGAGAGAAGTAATAGAAAATTGTAGAGCATTGAAAGAGGTAAATTTAAAGAACTGTAGTTTGGTTGATGATGATTTTGTTTCTGAGCTAAAAACCTTTACAAGGTCATCATTGAGAAAAATAATCACACCTTATGGTGTCGGTGTTTATTATTGA 1737 0.3587 MIYANLTSKRPSRVSCFEQINMSVKYFPEKCWELVFRFLGQGHDLESVSMACKKFIPITNRVKFSLTLHDRTVLFLPRLLSRFLWLKVIDLSYFNGELKGLLHQISQSELDLDLVNLSNQRTLPIDELRELGSKMVNLKALICSNIGYLHDSHLVLIAYCFPFLEELDISFPLDSQASDFGIVRLSSMLENIRKIDLSGNHLITDKSLMSLCQNCRSMEEISFFKCFKMSQIGIVSAIRMRPGLASISFNIEKKRIHGPGLTPLHINLDLIDSLTTLKRLNTIDLSNSFISDEFLISVADGSSVFLKKLVLQDCCNFTFSGIFYVLSKCQYVQCLDLRKADFLTDESISKLSTFLLNLTSIDLGGCCQLTNSTFFILTRNCPFLSDIKMERTYIGVQGEEDSNSMFNFAINHQVKTVYLGDNILLKDASLIKFSFICPSLQLLDLNACEGISGESLVEVMKRCCEIRHLNLANTIIKRFEINFEVSKLGMLNLSGSRIEDEALSIISKWCSGLLLLDIQNCYVTAKGVREVIENCRALKEVNLKNCSLVDDDFVSELKTFTRSSLRKIITPYGVGVYY 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02306 578 SMART LRR_CC_2 510 534 IPR006553 -
Car06g02306 578 SMART LRR_CC_2 535 560 IPR006553 -
Car06g02306 578 SMART LRR_CC_2 277 301 IPR006553 -
Car06g02306 578 SMART LRR_CC_2 355 380 IPR006553 -
Car06g02306 578 SMART LRR_CC_2 437 462 IPR006553 -
Car06g02306 578 SMART LRR_CC_2 329 354 IPR006553 -
Car06g02306 578 SMART LRR_CC_2 303 328 IPR006553 -
Car06g02306 578 SMART LRR_CC_2 189 214 IPR006553 -
Car06g02306 578 PANTHER UNCHARACTERIZED 280 561 - -
Car06g02306 578 PANTHER UNCHARACTERIZED 25 337 - -
Car06g02306 578 SUPERFAMILY RNI-like 271 556 - -
Car06g02306 578 SUPERFAMILY RNI-like 71 318 - -
Car06g02306 578 Gene3D Ribonuclease Inhibitor 260 395 IPR032675 -
Car06g02306 578 Gene3D Ribonuclease Inhibitor 18 258 IPR032675 -
Car06g02306 578 Gene3D Ribonuclease Inhibitor 396 475 IPR032675 -
Car06g02306 578 Gene3D Ribonuclease Inhibitor 476 570 IPR032675 -
Car06g02306 578 PANTHER NODULIN-LIKE PROTEIN 25 337 - -
Car06g02306 578 PANTHER NODULIN-LIKE PROTEIN 280 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02306 Car-Chr6 24306783 24308737 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02306 K10268 - gmx:100811565 793.112