Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02301 ATGTTGCTTTGTTCAAAGCGTTCACGAAACGGCGTCGTATCGGGATCGGTGCCGGTTTACCTTAATGTTTACGATCTGACACCAATCAACGGTTACGCTTACTGGTTTGGTCTCGGTGTTTACCATTCCGGTGTTCAAGTTCATGATGTTGAGTATGCATTTGGAGCACACGAGTATTCATCAACAGGTATATTTGAAGGAGAACCAAAGAGATGTGAAGGGTTCAGATTTAGGAAGACAATATTGATTGGAAAAACAGACAAAGGAGTTAGTGAAGTGAGAGGTGTGATGGAAGAACTTGCTGGTGAATACAAAGGAAATGCTTACAATCTCATTACAAAAAATTGTAATCATTTTTGTAATGATGCTTGTGTTAAACTAACTGGAAAATCTATACCAAGTTGGGTTAATCGTCTTGCTAGGATTGGTTTTATGTGCAATTGTGTTCTACCCGTGACTTTGAATTCAACTAAAGTTAGGCATCATAGAATAGAAGACAAACAATGTGAAGGAGAGAAACAAACACTAACAAGTGAACCAAACAAGGTTATTGTTTCAAATTCAACATCATCTTCACCTGCTTCTAGCTCTGGATTGagaagaggaagaagtagaacaagaCGTGCTCTTCCTCCACCTTCACCTTTGATTATTGGATCCTCTTCATCTTGA 672 0.375 MLLCSKRSRNGVVSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHDVEYAFGAHEYSSTGIFEGEPKRCEGFRFRKTILIGKTDKGVSEVRGVMEELAGEYKGNAYNLITKNCNHFCNDACVKLTGKSIPSWVNRLARIGFMCNCVLPVTLNSTKVRHHRIEDKQCEGEKQTLTSEPNKVIVSNSTSSSPASSSGLRRGRSRTRRALPPPSPLIIGSSSS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02301 223 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Car06g02301 223 PANTHER DESUMOYLATING ISOPEPTIDASE 8 223 IPR008580 GO:0008233
Car06g02301 223 PANTHER F23A5.4 PROTEIN 8 223 - -
Car06g02301 223 MobiDBLite consensus disorder prediction 170 223 - -
Car06g02301 223 MobiDBLite consensus disorder prediction 174 200 - -
Car06g02301 223 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Car06g02301 223 Gene3D PPPDE domains 13 171 IPR042266 -
Car06g02301 223 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02301 Car-Chr6 24235985 24240837 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02301 K22763 - gmx:100796813 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02301 06 24235985 24240837 Car06g02301 06 24235985 24240837 ECH