Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02293 ATGGCACTATTGTTCCGTTCCCTCAGAAAAACCCTAACCCACCAAATTCACATTCAACAACAACGACTATGCATTTGTCCTCCTCACATCATTTCCCGAAGAAATTACATCTCCGAAATGCGCAAAAAAGCTTTCGAAGGAAACATTGCCAGACTCATTCGTAACGAAATTCAGTACGAGCTCCAATCTTCTCCTCCTTCCAATCCCCCTAATAACAAGTTTGGTTCCTTTTTGGTGGATGGACGACCCGGTGAGCGATGGGTTACATTGAAAAGACAATTTGCAGATGAAAATATTAAAGTTGAAGTCACCATGTTTGATGGAGCTGTTCCAGCTCCGAAAGCAAGTGGCGGTGTGGCTAATGCAGATGAAGTGCAGCTACACATTACCTTAATTGTCAACATCTCTAAAGGAGATGGTGGTGTGCTGGAAATCATGTGCTCTGCTTGGCCGGACAGTATAGAGATAAAAAGGCTATTCATCCGCGCACGCAAAAATATGCCGGCTGAACCCTATTCTGGTCCTGAATTTGAGACAGCCTTTATGATTTCTTGGATGTAA 561 0.4349 MALLFRSLRKTLTHQIHIQQQRLCICPPHIISRRNYISEMRKKAFEGNIARLIRNEIQYELQSSPPSNPPNNKFGSFLVDGRPGERWVTLKRQFADENIKVEVTMFDGAVPAPKASGGVANADEVQLHITLIVNISKGDGGVLEIMCSAWPDSIEIKRLFIRARKNMPAEPYSGPEFETAFMISWM 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02293 186 Pfam Mitochondrial glycoprotein 54 178 IPR003428 GO:0005759
Car06g02293 186 PANTHER COMPLEMENT COMPONENT 1 4 178 IPR003428 GO:0005759
Car06g02293 186 Gene3D Mitochondrial glycoprotein 46 180 IPR036561 -
Car06g02293 186 PANTHER MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN 4 178 - -
Car06g02293 186 SUPERFAMILY Mitochondrial glycoprotein MAM33-like 44 178 IPR036561 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02293 Car-Chr6 24130268 24132406 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02293 - K15414 gmx:100797340 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02293 06 24130268 24132406 Car06g02293 06 24130268 24132406 ECH