Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02288 ATGCCGCTAATTTTGCCAAAAAGCGATTTGATTCAGATTCGTGAAGTGTGGAACGATAATCTCGAAGAAGAGTTTGCTTTGATTCGAGAAATCGTAGATGATTATCCTTATATAGCTATGGACACGGAATTCCCCGGAATTGTTCTTCGACCGGTTGGGAATTTCAAGAGCAGCTATGATTATCATTACCAAACCCTAAAAGACAATGTGGATATGCTGAAACTCATTCAATTGGGTCTCACTTTTTCCGATGAGCATGGTAACCTTCCAAAAATTGGCGACGATGATGATAGGTTTTGTATTTGGCAGTTCAATTTTAGAGAATTCAATGTCAATGAGGATGTTTTTGCAAATGACTCTATTGAGCTTTTGAGACAGAGTGGGATTGATTTCAAGAAGAATAACGAGGAGGGTATTGATGCCCGACGTTTCGGTGAGCTTTTGATGTCTTCTGGGATTGTTTTGAATGATAATGTTCATTGGGTAACTTTTCATAGTGGATATGATTTTGGATATTTGTTAAAGCTTTTAACTTGTCAGAATTTGCCTGATACACAAGTTGGGTTCTTTAATTTGATCAACATGTATTTTCCAACTGTGTATGATATCAAACATCTAATGAAGTTTTGTAATAGTCTTCATGGAGGGTTGAACAAGCTTGCCGAGTTGTTGGAAGTGGAGAGAGTTGGGATTTGTCATCAGGCGGGTTCAGATAGTTTGCTCACATCGTGTACATTCAGGAAATTGAAAGAGAACTTTTTTAGTGGATCTATGGAGAAATATGCCGGGGTGTTGTATGGTTTAGGTGTTGAGAATGGACAGAGTGCACATTGA 834 0.3825 MPLILPKSDLIQIREVWNDNLEEEFALIREIVDDYPYIAMDTEFPGIVLRPVGNFKSSYDYHYQTLKDNVDMLKLIQLGLTFSDEHGNLPKIGDDDDRFCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKKNNEEGIDARRFGELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCQNLPDTQVGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENFFSGSMEKYAGVLYGLGVENGQSAH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02288 277 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4 276 IPR039637 GO:0004535|GO:0030014
Car06g02288 277 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 6-RELATED 4 276 - -
Car06g02288 277 Gene3D - 1 272 IPR036397 GO:0003676
Car06g02288 277 SUPERFAMILY Ribonuclease H-like 13 268 IPR012337 -
Car06g02288 277 Pfam CAF1 family ribonuclease 16 139 IPR006941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02288 Car-Chr6 24055130 24056456 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02288 K12581 - gmx:100789409 538.495