Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02261 ATGGCTTCTGCTACTTCTGGTGTTGTTGGTGGTAATGGATCTTCTGTTTCTTGGATGCAATTCAAAAAAAGGGAAAAGAAACAAAATCAGATGAATAACAAGAGTAGGGTTTGTTGTTCTTCTTCTTCTATGATGGATCCTTATAAGACATTGAGAATTCAACCAGGTGCTTGTGAATCTGATGTTAAGAAAGCTTTTAGACAGCTTGCTTTGAAGTATCATCCAGATGTTTGTAGAGGGAACGATTGTGGAGTTCAGTTTCACCAAATCAATGAGGCTTATGATGTTGTGATGGCAAATTTGAGAGAAGAGTCAAATGTGACAGAAACCTATGAAGCACATGATGAAGACGATGAGTCATTTAGAGGAATGAATGATCCAGATTGGGAATATTGGGAAGAATGGATGGGTTGGGAAGGAGCAGGAATCCGTGATTACTCTTCACATATTAATCCTTACATTTAA 465 0.3785 MASATSGVVGGNGSSVSWMQFKKREKKQNQMNNKSRVCCSSSSMMDPYKTLRIQPGACESDVKKAFRQLALKYHPDVCRGNDCGVQFHQINEAYDVVMANLREESNVTETYEAHDEDDESFRGMNDPDWEYWEEWMGWEGAGIRDYSSHINPYI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02261 154 CDD DnaJ 46 96 IPR001623 -
Car06g02261 154 PANTHER CO-CHAPERONE PROTEIN DJLA 5 154 - -
Car06g02261 154 Pfam DnaJ domain 46 98 IPR001623 -
Car06g02261 154 Gene3D DnaJ domain 17 107 IPR036869 -
Car06g02261 154 ProSiteProfiles dnaJ domain profile. 46 115 IPR001623 -
Car06g02261 154 PRINTS DnaJ domain signature 48 66 IPR001623 -
Car06g02261 154 PRINTS DnaJ domain signature 66 81 IPR001623 -
Car06g02261 154 PRINTS DnaJ domain signature 82 102 IPR001623 -
Car06g02261 154 PANTHER HEAT SHOCK PROTEIN BINDING PROTEIN 5 154 - -
Car06g02261 154 SUPERFAMILY Chaperone J-domain 41 140 IPR036869 -
Car06g02261 154 SMART dnaj_3 45 102 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02261 Car-Chr6 23507617 23509819 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02261 - - gmx:100780336 231.106