Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02247 ATGGGTTCTAGAATCCCATCGCATCAGCTTAGCAATGGCCTTTACGTATCAGGGCGGCCTGAGCAGCCGAAAGAAAGGACTCCAACGATGTCCTCAGCGGCCATGCCATATACCGGTGGAGACATCAAGAAGTCAGGAGAATTGGGAAAAATGTTTGATATTCCCGTCGATGGATCTAAATCTAGAAAATCTGGACCAATAACAGGTGGTGCTCCATCACGAGCAACATCTTTTGGAGGAGCTGGTTCACATTCTGGACCGATTCATCCTAATGCTGCTGCACGGGCTATCTATACTACTTCAGGTTCCATGTCTTCTGGTGTAAAGAAATCGAATTCCGGGCCATTGAATAAGCACGGGGAACCGGTTAAAAAGTCTTCGGGTCCTCAATCCGGCGGAGTAACTCCAACCGGGCGTCAAAACTCCGGTCCTCTTCCTCCTGTTCTTCCCACAACAGGTCTTATTACATCCGGTCCAATAACGTCTGGCCCGCTAAACTCGTCTGGTGCGCCTAGGAAAGTGTCAGGTCCTTTGGAAGCGATGGGTTCTATGAAGATGCAAGGTTCTGCTGCTGCTGTTCCCAATCAAGCTGTTACTGTTCTTAGTCAAGTTTCTGCGTCTTTCACTTGGAACACTTATTGGGGGAGAAGAGCTATCATGGGCTTTGTTGCTAATTATCCAGACTCTGAGCTTCGAACTGCAAAGAACGGGCAATTTGTGAAGGTCTCCGGGGTTGTCACTTGCGGTAATGTGCCTCTTGAGTCATCTTTCCAGAAAGTTCCCAGATGTGTATATACATCAACAAGTTTATATGAGTATCGGGGATGGAACTCAAAAGCTGCCAATCCTACACATCGCCGATTTTCTTGGGGCCTTAGATTGCTTGAACGGCGTGTGGTTGACTTTTACATCTCAGACTTCCAGTCTGGTTTAAGGGCATTGGTTAAGACTGGTCATGGAGCAAGAGTGACTCCTTATGTTGATGACTCAGTTCTCATCAATGTAAATCCAACTAAAGAAGAGTTGTCTCCTGAGTTCCTCCGATGGTTGGGGGAGAGAAATCTGTCAAGTGACGACCGCATCATGCGGCTTGAAGAAGGGTATATTAAAGAAGGAAGCACAGTGAGTGTAATGGGGGTTGTTCAAAGGAATGAGAATGTGCTTATGATTGTTCCTCCACCAGATCCAATCACAACAGGTTGCCAATGGTTCAAATGTATTTTTCCAGCTAGCTTGGAGGGTATAGTCTTAAGATGTGAGGACATGTCCAAGAATGATGTCATACCAGTTTAA 1293 0.464 MGSRIPSHQLSNGLYVSGRPEQPKERTPTMSSAAMPYTGGDIKKSGELGKMFDIPVDGSKSRKSGPITGGAPSRATSFGGAGSHSGPIHPNAAARAIYTTSGSMSSGVKKSNSGPLNKHGEPVKKSSGPQSGGVTPTGRQNSGPLPPVLPTTGLITSGPITSGPLNSSGAPRKVSGPLEAMGSMKMQGSAAAVPNQAVTVLSQVSASFTWNTYWGRRAIMGFVANYPDSELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRCVYTSTSLYEYRGWNSKAANPTHRRFSWGLRLLERRVVDFYISDFQSGLRALVKTGHGARVTPYVDDSVLINVNPTKEELSPEFLRWLGERNLSSDDRIMRLEEGYIKEGSTVSVMGVVQRNENVLMIVPPPDPITTGCQWFKCIFPASLEGIVLRCEDMSKNDVIPV 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02247 430 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19-RELATED PROTEIN 198 430 - -
Car06g02247 430 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19-RELATED PROTEIN 1 197 - -
Car06g02247 430 MobiDBLite consensus disorder prediction 1 90 - -
Car06g02247 430 MobiDBLite consensus disorder prediction 154 169 - -
Car06g02247 430 PANTHER OSJNBA0035M09.9 PROTEIN 198 430 IPR040339 -
Car06g02247 430 PANTHER OSJNBA0035M09.9 PROTEIN 1 197 IPR040339 -
Car06g02247 430 MobiDBLite consensus disorder prediction 103 178 - -
Car06g02247 430 MobiDBLite consensus disorder prediction 1 16 - -
Car06g02247 430 MobiDBLite consensus disorder prediction 128 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02247 Car-Chr6 23194150 23200296 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02247 - - pvu:PHAVU_008G253800g 793.497