Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02215 ATGTCTTCAACTTCAATCCTCAAACTTCTTTCTTTTACCTTCCTTTCCATCTTCACTATTGTTTCTGCTAGCTACCAAGAAGGCAAGAAAACTGTCACTTACGACGGTAGATCGCTCATTATCAATGGAAAACGAGAACTTTTCTTCTCCGGTTCCATCCATTATCCACGAAGCACTCCAGATATGTGGCCAGAAATTCTTGATAAGGCCAGACATGGAGGCTTAAACTTAATCCAAACTTATGTGTTTTGGAATGTTCATGAGGCTGATAAAGGCCAGTTGAGCTTCGAAGGTAGATATGATTTGGTAAAGTTCATTAAGCTGGTTCAAGAGAAAGGAATGTATGTTACCCTTAGAGTTGGACCATTCATCCAAGCTGAATGGAATCACGGAGGACTTCCATATTGGCTAAGAGAGGTTCCTGACATCATATTCCGTTCTAACAATGAGCCTTTTAAGAAACACATGAAAGAATATGTATCATCTGTTGTAGAAAAAATGAGAGAAGCAAAGCTCTTTGCTCCACAAGGAGGTCCTATCATCTTGGCACAGATTGAGAATGAGTACAACCATATCCAACTTGCTTATGAAGCTGATGGAGATAATTATGTTCAGTGGGCTGCAAAAATGGCCATTTCATTGGATGTTGGAGTTCCATGGATCATGTGCAAGCAAAAGGATGCTCCTGATCCAGTGATTAATGCATGCAATGGAAGGCACTGTGGTGATACCTTCACAGGACCAAACAAACCATACAAGCCTTCCATATGGACTGAAAACTGGACTGCTCAGTACAGAGTATTTGGAGATCCACCATCCCAAAGATCTGCAGAAGACATTGCCTTCTCAGTTGCTCGCTTCTTCTCTAAGAATGGATCTTTAGTTAACTATTATATGTATCATGGTGGAACAAATTTTGGTAGAACAAGTTCTGCTTTTACAACTACCCGTTATTACGACGAAGCTCCTCTTGATGAGTTTGGTCTTCAGAGAGATCCAAAATGGAGTCACCTTAAGGATGTTCACAAAGCTTTGAGCTTATGCAAGAAGCCTCTACTCAATGGTGAACCTACTACCCAAAAAATTAGCCAGTTTCATGAGGTTATAGTATATGAAAATAAAGGCAGTAATTTATGTGCTGCTTTCATCACAAACAACCACACCAAAATGGCAAAAACAATTCAATTCAGAGGCTCAAACTATTATTTGCCACCACGTTCAATCAGCATTCTTCCTGATTGCAAAACTGTAGTCTTCAACACTCAAAATATTGCTTCACAACACAATTCAAGAAACTTCAAGCAGTCAAAGAATGCAAACAATCACAAGTGGGAGGTGTTTACTGAGCCCATTCCAACTACAAAGGAATTGCCACCCAGTAAAAAAGTTCCTGCAGAGCTTTACAGCATGCTTAAGGACACCACTGATTATGGATGGTACACCACAAGTGTGGAATTGGGTCCAGAAGACTTGCCCAAGAAGAATGAGATATCACCAGTTCTTCGAATTATGAGCCTTGGCCATTCATTACTTGCCTTTGTAAATGGAGAATACATTGGATCCAATCATGGTAGCCATGAAGAGAAAGGTTTTGAATTTCAGAAGCCTGTAAGCTTCAAGGTTGGAGTTAACCAAATAGCTATCTTGGGTTCCTTAGTAGGACTCCCTGATAGTGGAGCATACATGGAACATAGGTATGCTGGACCTAAGACCATAACCATCCTTGGTTTGAACTCTGGAACAATTGGTCTCACTGTTAATGGTTGGGGTCATCAGGTTGGTCTCTATGGTGAGAAGCATAGCATTTTCACTGAGGAGGGATCAAAGAAAGTACAATGGAAAGAGGTCAAGGGACATGGACCACCTCTCTCTTGGTACAAGACAAATTTTGAAACACCAGAGGGAAAGGGTCCAGTTGCCATCAAATTGGATGGTATGGGAAAAGGAATGATTTGGATCAATGGTGAAAGTGTTGGTCGTCACTGGTTGAGCTACCTCTCTCCTCTTGGAAAGCCTACTCAGTCAGAGTACCACATTCCAAGATCTTTCTTTAATGCAAAATCAAAAAACAACTTGCTTGTTATATTGGAAGAAGAGGCAGCAAGTCCAGAAAAGGTTGTGATCCAAATTGTGAACAGAGATACAGTATGCAGTTACATTACAGAGAATCACCCACCCAATGTTAATTCATGGGCAAGTAAGGACCAAAAACTCACACCTATTGTGGACAACCTGGGTCCACAAGCTTCCCTCAAGTGTCCAAACCACAAAACCATTATTGCTGTTGATTTTGCAAGCTATGGTGATCCTTTGGGTTTCTGTGGTGAGTTTATTATGGGAAAATGTCATGCACCTGCCTCCAAGAAGATTGTTGAACAGCATTGCTTAGGAAAAGAAAGTTGTTCGGTTCCAATGAACAAAGCATCATTCACAAATGGACAGGATGGCTGCCCAGATGTGATGAAGACACTTGCAATCCAAGTGCAGTGTGGTGGCACTAGGAAACCTTCCAGCAGGTGA 2520 0.4123 MSSTSILKLLSFTFLSIFTIVSASYQEGKKTVTYDGRSLIINGKRELFFSGSIHYPRSTPDMWPEILDKARHGGLNLIQTYVFWNVHEADKGQLSFEGRYDLVKFIKLVQEKGMYVTLRVGPFIQAEWNHGGLPYWLREVPDIIFRSNNEPFKKHMKEYVSSVVEKMREAKLFAPQGGPIILAQIENEYNHIQLAYEADGDNYVQWAAKMAISLDVGVPWIMCKQKDAPDPVINACNGRHCGDTFTGPNKPYKPSIWTENWTAQYRVFGDPPSQRSAEDIAFSVARFFSKNGSLVNYYMYHGGTNFGRTSSAFTTTRYYDEAPLDEFGLQRDPKWSHLKDVHKALSLCKKPLLNGEPTTQKISQFHEVIVYENKGSNLCAAFITNNHTKMAKTIQFRGSNYYLPPRSISILPDCKTVVFNTQNIASQHNSRNFKQSKNANNHKWEVFTEPIPTTKELPPSKKVPAELYSMLKDTTDYGWYTTSVELGPEDLPKKNEISPVLRIMSLGHSLLAFVNGEYIGSNHGSHEEKGFEFQKPVSFKVGVNQIAILGSLVGLPDSGAYMEHRYAGPKTITILGLNSGTIGLTVNGWGHQVGLYGEKHSIFTEEGSKKVQWKEVKGHGPPLSWYKTNFETPEGKGPVAIKLDGMGKGMIWINGESVGRHWLSYLSPLGKPTQSEYHIPRSFFNAKSKNNLLVILEEEAASPEKVVIQIVNRDTVCSYITENHPPNVNSWASKDQKLTPIVDNLGPQASLKCPNHKTIIAVDFASYGDPLGFCGEFIMGKCHAPASKKIVEQHCLGKESCSVPMNKASFTNGQDGCPDVMKTLAIQVQCGGTRKPSSR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02215 839 SUPERFAMILY (Trans)glycosidases 28 349 IPR017853 -
Car06g02215 839 Gene3D - 406 564 - -
Car06g02215 839 SUPERFAMILY Galactose-binding domain-like 408 569 IPR008979 -
Car06g02215 839 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Car06g02215 839 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Car06g02215 839 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Car06g02215 839 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Car06g02215 839 PRINTS Glycosyl hydrolase family 35 signature 256 271 IPR001944 GO:0004553|GO:0005975
Car06g02215 839 PRINTS Glycosyl hydrolase family 35 signature 293 308 IPR001944 GO:0004553|GO:0005975
Car06g02215 839 PRINTS Glycosyl hydrolase family 35 signature 312 328 IPR001944 GO:0004553|GO:0005975
Car06g02215 839 PRINTS Glycosyl hydrolase family 35 signature 621 635 IPR001944 GO:0004553|GO:0005975
Car06g02215 839 PRINTS Glycosyl hydrolase family 35 signature 648 664 IPR001944 GO:0004553|GO:0005975
Car06g02215 839 ProSiteProfiles SUEL-type lectin domain profile. 743 831 IPR000922 GO:0030246
Car06g02215 839 Pfam Galactose binding lectin domain 751 830 IPR000922 GO:0030246
Car06g02215 839 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 24 827 - -
Car06g02215 839 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Car06g02215 839 Gene3D Glycosidases 29 348 - -
Car06g02215 839 Pfam Beta-sandwich domain in beta galactosidase 352 424 IPR041392 -
Car06g02215 839 Pfam Glycosyl hydrolases family 35 38 344 IPR031330 -
Car06g02215 839 Gene3D - 595 723 - -
Car06g02215 839 SUPERFAMILY Galactose-binding domain-like 586 736 IPR008979 -
Car06g02215 839 Gene3D - 743 835 IPR043159 -
Car06g02215 839 PANTHER BETA-GALACTOSIDASE RELATED 24 827 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02215 Car-Chr6 22759273 22765550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02215 32 835 Glycoside Hydrolase AT2G16730 61.262 0.0 1064
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02215 - - gmx:102663614 1359.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02215 06 22759273 22765550 Car06g02215 06 22759273 22765550 ECH