Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02214 ATGGAAACTCGTAGTCGGAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCTTCCTCATCCGGTCCCACCACTCGTTCCAGTAAACGTGCCCGtctctcttcttcttctacttcttccgccaccgcaacagcaacaaccaccgccgctaccatcaccacTCCTAAAAACCGTTCTGCCAACACTCGTTCACGCGCATCCAAGAACAAGGAACCCTTACCACCTAAAAATCCTATTCCCATGGACTCCAACAATGAATCATCCTCCGGTTCACGCCGTGATCGCCGTGGCAAGAATTTGGATAGGGATAACTCCGACAAGGGAAAGGAAAAGGAACACGATGTTAGGATTAGGGATAGGGATGCAGAAAGAGGGATTTCATTGAACGTGGAAACTGGTGGTGCTGGAGATGAGGATGATAACGATAGTGACAGTGGTGTTGGGATTTTGCATCCGAATTTAACATCTGCAAGTAGTGCACTCCAAGGTCTTCTTCGTAAACTCGGTGCTGGCTTGGATGATCTGCTTCCTTCATCCGGGATGGGTTCTTCTTCCTCTCATCAGAGTGGGAGGTTGAAGAAGATTCTATTTGGGCTACGTGCAGACGGGGAAGAAGGTAAGCAGGTCGAGGCTTTGACTCAGCTTTGTGATATGCTTTCTATTGGGACTGAGGAATCGCTTAGTACTTTCTCTGTTGATTCGTTTGTACCGGTGCTCGTGGGGTTGCTGAATCACGAGAGCAATCCTGATATCATGCTTCTAGCAGCAAGGGCGCTAACACATCTCTGCGACGTGCTGCCTTCATCTTGTGCTGCTGTTGTGCATTACGGAGCTGTTTCGATCTTCTGCGCGAGGTTGCTCACTATAGAGTATATGGACTTGGCTGAGCAGTCCCTCCAAGCTCTAAAGAAGATATCTCAGGAACACCCAACTGCCTGCCTACGAGCTGGGGCTCTTATGGCCGTGCTTTCTTATTTGGACTTCTTCTCAACAGGAGTTCAGCGTGTTGCATTATCTACTGCTGCAAACATGTGCAAGAAGCTTCCTTCAGATGCAGCTGACTTTGTGATGGAAGCTGTTCCTCTTCTGACAAACCTCCTTCAGTACCATGATTCCAAGGTCCTGGAGCATGCCTCTGTTTGTTTGACTCGGATAGCTGAAGCATTTGCATCTTCTTCGGACAAGTTAGATGAATTGTGCAATCATGGACTGGTAACACAGGCTGCATCGCTCATTTCTAACAGTAGTTCTGGAGGTGGACAGGCTTCTCTCAGCACGCCAACATATACTGGTTTAATTCGACTTCTTTCAACCTGTGCAAGTGGTTCCCCTCTTGGATCTAAAACTTTGCTTCTTCTCGGAATTAGTGGTATTCTTAAAGATATTCTATTTGGTTCTGGTGTTTCTTCTAATGCCTCTGTTTCTCCTGCATTAAATAGGCCACCAGAGCAGATATTTGAGATTGTAAACTTGGCAAATGAGCTTCTTCCCCAATTGCCACAAGGAACTATTTCCCTCCCTGTCAGCACCAACTTTGCAAAGGGGCCTGCTGTAAAAAAGTCTCCTGCCGGTAGTTCTGTGAAACAAGAAGACACAAATGGAAATGTTCCTGAGATATTGGCTCGTGAGAAGCTATTAAATGATCAGCCTGAGCTTCTTAAGCAATTTGGGTTGGATCTCCTCCCAGTTTTGTTACAGATATATGGTTCTAGCGTCAATATGTCTGTTCGGCACAAATGTCTTGCAGTAATTGGAAAGTTGATGTATTTCAGCACAGCAGAGATGATCCAGTCTTTGTTAAGCGTTACAAATATATCCAGTTTCTTAGCTGGAGTCTTGGCATCGAAAGATCCTCATGTTTTGATACCTGCCTTGCAAATTGCTGAAATTCTTATGGAAAAGCTTCCTGGGACATTCTCTAAAATGTTTATCAGAGAAGGTGTAGTCCATGCAGTGGACCAACTTATTTTGCCAGGAAATTCAACTAATGTCTCTACACAAGCATCTTCTGCAGAGAAGGATACGGAGTCCATACCCGGATCGTCTTCATCTCGCTCTAGGCGTCATCGGCGACGCTTTGGCAACTCCAATCCTGAAGGAAATCCTTTGGACGATCTGAAGAGTCCTGTTTCGGTAAGTGTGGGCTCTCCTCCAAGTTCTGTGGATAATCCAACAGTAAATTCAAGTATCCGGTTATCTGTTAGCACAGCTGCAAAAACTTTTAAAGATAAGTACTTTCCATCGGATCCCGGGGCTGCTGAAGTGGGTGTTACTGAGGATCTTTTGCATCTGAAAAATCTTTGCATGAAGTTAAATGCTGGTGTTGATGACCAAAGGACTAATGGTAAGGGGAAATCTAAAACTTCTGGATTTGGTCTGGAGGAGCATTTAATTGGGATCATATCTGACATGCTACAGGAACTTGGTAAAGGAGATGGTGTATCTACTTTCGAATTTATTGGTAGTGGTGTTGTTGCCGCTTTGCTAAATTATTTATCGTGTGGGTACTTCTCTAAAGATCGACCCTCAGAAACCCACCTGCCCAAGCTTCGCAAACAAGCACTTACAAGGTTTAAATTGTTTATATCTGTTGCACTGCCTGCTACTATTGACAATAGGGATGCAGCTCCTATGACTGTCTTGGTTCAAAAGCTTCAAAATGCTCTGTCCTCCATGGAGCGTTTCCATGTTTTGCTGAGTCAATCATCTAGGTCATCTGGTGGAAGTGCACGCCTCTCCTCAGGACTAAGTGCATTATCCCAGCCATTCAAATTGCGTCTTTGTCGAGCCCAGGGGGAAAAGTCACTTAAGGATTATTCATCCAATGTTGTATTGATCGATCCATTAGCAAGTTTAGCAGCCATTGAGGAATTTCTCTGGCCTCGTATCCAGCGAAGCGAATCTGTTCAGAAGGGCACTGCACCAGCTGGGAATGAATCTGGGACAAGTCCTGTAGGAACTGGTGTTTCACCTCCTACCTCTACTCCGTCCGCTACCCGTCGTCATTCTACGAGATCCAGATCATCTGCTAGTATAGGGGATACACCCAGAAAAGAAACAACTCAAGATAAAAGCTTGAGCTCATCTAAGGGTAAGGGAAAAGCTGTATTAAAGCCTGCACAAGAGGACGCAAGAGGACCTCAAACCAGGAATGCTGCACGCAGAAGAGCAGCTCTTGATAAAGATGTTCAAATGAAGCCTGCAAATGGGGATTCTACTTCTGAGGATGATGATTTAGATATATCTCCTGTTGAAATtgatgaggctttggtgatcgaagatgatgatgatgatgatgatatttctgacgatgaagatgacgaccatgaagaCATGCTGAGGGATGACTCCCTTCCTGTTTGTGTACCTGACAAAGTACATGATGTGAAATTGGGTGACTCAGCTGAGGAGACTAATGTTGCTCCTGCAACTAACGATGGCCAGACTAACACAGCTTCTGGTTCTAGCAGCAAAGTTGCTTCAGTCAGGGGGTCAGACACAGCAGATTTTAGGAGTGGCTTTTCTTCTAGTTCTCGAGGTGCAATGTCATTTGCTGCTGCTGCCATGGCTGGACTTGGATCTGCTAATAGCAGGGGAATCAGGGGTAGCAGAGATCGGCAAGGGCGTCCATTGTTTGGTAGTTCTAATGATCCCCCAAAGTTAATCTTTACTGCTGGCGGGAAACAACTGAACAGGCAGTTGACTATTTATCAAGCAGTTCAAAGACAATTTGTACTAGATGAAGAGGACGATGAGAGATTTGCTGGCAGTGAATTAATGTCAAGCGACGGAAGCAGACTGTGGGGTGACATTTTCATATTAACTTATCAGAAGGCGGAGAGCCAAACAGATAGGGCATCCCCAGGAGGTCAAAGTTCAAACACTTCCAGATCTAGTAAATCTGGGTCCGTATCAAATTGCAGTTCGGATGGAAAGCTGCATCAGACATCTGTATTGGATAGTATCTTGCAGGGAGAATTGCCCTGTGAGCTGGAGAAATCTAATCCTACATACAATATATTGGCGCTATTGCGTGTGCTGGAGGGTTTAAACCAGTTGGCACCTCGTTTGAGGGCCCAAGTGGCTACTGATAGCTTTGCTGAGGGAAAATTTTTGGATCTAGATGAGCTAGCTGTTGCCCCTGGTGCTAAGGTTCCTCTGGAGAAATTTATAAGCAACAAGCTTACTCCAAAATTAGCTAGGCAGATACAGGACGCCCTTGCGCTGTGCAGTGGGAGTCTTCCCTCATGGTGTTACCAGTTAACCAAAGCGTGCCCTTTTCTGTTTCCATTTGAGATCCGAAGACAGTACTTCTATTCAACTGCCTTCGGGTTATCTCGTGCACTGTATCGACTCCAGCAGCAGCAGGGTGCCGATGGTCATGGATCAACAAATGAAAGAGAGGTTAGGGTTGGAAGGCTGCAGCGCCAAAAGGTTCGTGTCTCTCGAAACCGCATTTTGGATTCTGCTGCTAAAGTGATGGAGATGTATTCTAGCCAAAAGGCTGTACTTGAAGTTGAATATTTTGGTGAAGTTGGCACTGGTCTTGGTCCCACCCTTGAGTTCTATACACTTCTAAGCCACGACTTACAAAAAGTTGGACTTCAGATGTGGAGATCTGGTTCCGATCAAATGGAAATTGATGGAGAGGAAAAGAAAATGAAAAATAGTGAAGGCAATATTGCTAGAGATGGGGCACTTGTTCATGCTCCACTTGGGTTGTTTCCTCGTCCCTGGCCTGCAAATGCTGAAGCATCAGAGGGTAGCCAGTTTTTTAAAGTGATTGAATATTTCCGCCTTTTAGGTCGCGTAGTGGCTAAAGCCCTTCAAGATGGACGTCTATTAGATTTGCCATTATCTGTTGCATTTTATAAGCTTGTTCTTGGTCAAGATCTTGATTTGCATGACATTCTTTACATTGATGCTGAACTTGGGAAAACTATTCAAGAGTTGAATGCCCTTGTTTGTCGGAAACATCATATAGAATCGATTGGTGATGGTTATACTGGTACAGCTGCAAATTTACATTTCCGTGGAGCTCCAATTGCAGAACTCTGCTTGGATTTTAGCCTTCCTGGTTATCCAGAGTACACCTTGAAACCTGGGGACGAAATTGTTGACCTCAATAATCTTGCGGAGTATATATCCATGGTTGTTGATGCCACTGTCAAGACTGGAATAACGCGCCAACTGGAAGCCTTTAGAGCAGGGTTCAATCAGGTTTTTGACATCTCATCTTTACAAATTTTTACTCCTCAAGAATTGGATTATTTGCTATGCGGCCGAAGAGAATTGTGGAAGACCGAGACACTAGCTGATCATATAAAATTTGATCATGGGTATACTGCCAAGAGCCCCGCTATAGTGAATTTACTTGAAATTATGGGAGAGTTCACACCGGAGCAGCAGCGTGCCTTCTGTCAATTTGTTACTGGAGCACCTAAGCTTCCACCTGGTGGACTGGCTGTTCTAAATCCAAAATTAACGATTGTGAGAAAGCTGTCGTCAAATGCAGCTAACACTACATCCAATGGGAACGGACCTTCAGAAACAGCAGATGATGACTTGCCAAGTGTGATGACATGTGCTAATTACCTGAAGCTTCCTCCTTATTCTACCAAGGAAATTATGTACAAGAAGCTACTCTATGCAATCAATGAAGGCCAGGGATCCTTTGATTTATCATGA 5688 0.4381 METRSRKRAEASSAAPSSSSSGPTTRSSKRARLSSSSTSSATATATTTAATITTPKNRSANTRSRASKNKEPLPPKNPIPMDSNNESSSGSRRDRRGKNLDRDNSDKGKEKEHDVRIRDRDAERGISLNVETGGAGDEDDNDSDSGVGILHPNLTSASSALQGLLRKLGAGLDDLLPSSGMGSSSSHQSGRLKKILFGLRADGEEGKQVEALTQLCDMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDSKVLEHASVCLTRIAEAFASSSDKLDELCNHGLVTQAASLISNSSSGGGQASLSTPTYTGLIRLLSTCASGSPLGSKTLLLLGISGILKDILFGSGVSSNASVSPALNRPPEQIFEIVNLANELLPQLPQGTISLPVSTNFAKGPAVKKSPAGSSVKQEDTNGNVPEILAREKLLNDQPELLKQFGLDLLPVLLQIYGSSVNMSVRHKCLAVIGKLMYFSTAEMIQSLLSVTNISSFLAGVLASKDPHVLIPALQIAEILMEKLPGTFSKMFIREGVVHAVDQLILPGNSTNVSTQASSAEKDTESIPGSSSSRSRRHRRRFGNSNPEGNPLDDLKSPVSVSVGSPPSSVDNPTVNSSIRLSVSTAAKTFKDKYFPSDPGAAEVGVTEDLLHLKNLCMKLNAGVDDQRTNGKGKSKTSGFGLEEHLIGIISDMLQELGKGDGVSTFEFIGSGVVAALLNYLSCGYFSKDRPSETHLPKLRKQALTRFKLFISVALPATIDNRDAAPMTVLVQKLQNALSSMERFHVLLSQSSRSSGGSARLSSGLSALSQPFKLRLCRAQGEKSLKDYSSNVVLIDPLASLAAIEEFLWPRIQRSESVQKGTAPAGNESGTSPVGTGVSPPTSTPSATRRHSTRSRSSASIGDTPRKETTQDKSLSSSKGKGKAVLKPAQEDARGPQTRNAARRRAALDKDVQMKPANGDSTSEDDDLDISPVEIDEALVIEDDDDDDDISDDEDDDHEDMLRDDSLPVCVPDKVHDVKLGDSAEETNVAPATNDGQTNTASGSSSKVASVRGSDTADFRSGFSSSSRGAMSFAAAAMAGLGSANSRGIRGSRDRQGRPLFGSSNDPPKLIFTAGGKQLNRQLTIYQAVQRQFVLDEEDDERFAGSELMSSDGSRLWGDIFILTYQKAESQTDRASPGGQSSNTSRSSKSGSVSNCSSDGKLHQTSVLDSILQGELPCELEKSNPTYNILALLRVLEGLNQLAPRLRAQVATDSFAEGKFLDLDELAVAPGAKVPLEKFISNKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFEIRRQYFYSTAFGLSRALYRLQQQQGADGHGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLQMWRSGSDQMEIDGEEKKMKNSEGNIARDGALVHAPLGLFPRPWPANAEASEGSQFFKVIEYFRLLGRVVAKALQDGRLLDLPLSVAFYKLVLGQDLDLHDILYIDAELGKTIQELNALVCRKHHIESIGDGYTGTAANLHFRGAPIAELCLDFSLPGYPEYTLKPGDEIVDLNNLAEYISMVVDATVKTGITRQLEAFRAGFNQVFDISSLQIFTPQELDYLLCGRRELWKTETLADHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPKLPPGGLAVLNPKLTIVRKLSSNAANTTSNGNGPSETADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS 1895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02214 1895 MobiDBLite consensus disorder prediction 88 126 - -
Car06g02214 1895 Pfam HECT-domain (ubiquitin-transferase) 1525 1895 IPR000569 GO:0004842
Car06g02214 1895 SUPERFAMILY Hect, E3 ligase catalytic domain 1469 1888 IPR035983 GO:0004842
Car06g02214 1895 MobiDBLite consensus disorder prediction 1279 1311 - -
Car06g02214 1895 Gene3D Hect, E3 ligase catalytic domain 1767 1893 - -
Car06g02214 1895 SUPERFAMILY ARM repeat 192 666 IPR016024 -
Car06g02214 1895 CDD HECTc 1477 1890 IPR000569 GO:0004842
Car06g02214 1895 ProSiteProfiles HECT domain profile. 1595 1895 IPR000569 GO:0004842
Car06g02214 1895 PANTHER HECT E3 UBIQUITIN LIGASE-RELATED 58 1895 - -
Car06g02214 1895 MobiDBLite consensus disorder prediction 10 68 - -
Car06g02214 1895 MobiDBLite consensus disorder prediction 1195 1220 - -
Car06g02214 1895 SMART arm_5 223 264 IPR000225 GO:0005515
Car06g02214 1895 SMART arm_5 349 387 IPR000225 GO:0005515
Car06g02214 1895 SMART arm_5 306 346 IPR000225 GO:0005515
Car06g02214 1895 MobiDBLite consensus disorder prediction 1 150 - -
Car06g02214 1895 MobiDBLite consensus disorder prediction 712 727 - -
Car06g02214 1895 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 58 1895 IPR045322 GO:0006511|GO:0061630
Car06g02214 1895 MobiDBLite consensus disorder prediction 967 1016 - -
Car06g02214 1895 MobiDBLite consensus disorder prediction 1138 1176 - -
Car06g02214 1895 Gene3D Hect, E3 ligase catalytic domains 1418 1657 - -
Car06g02214 1895 Gene3D - 543 670 IPR011989 -
Car06g02214 1895 MobiDBLite consensus disorder prediction 1074 1112 - -
Car06g02214 1895 MobiDBLite consensus disorder prediction 1133 1176 - -
Car06g02214 1895 MobiDBLite consensus disorder prediction 1048 1062 - -
Car06g02214 1895 MobiDBLite consensus disorder prediction 967 1116 - -
Car06g02214 1895 SMART hect_3 1488 1895 IPR000569 GO:0004842
Car06g02214 1895 MobiDBLite consensus disorder prediction 663 727 - -
Car06g02214 1895 MobiDBLite consensus disorder prediction 663 682 - -
Car06g02214 1895 Gene3D - 180 489 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02214 Car-Chr6 22717715 22728794 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02214 K10590 - gmx:100783336 2938.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02214 06 22717715 22728794 Car06g02214 06 22717715 22728794 ECH