Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02206 ATGGCGATGGCTTTCAAAATGGCTACTACTGGGATGTGGGTAACAGAGGAGTGCAAGAACTCTTTCATGGAGATGAAGTGGAAAAAGGTACATAGATACATAGTTTTCAAGATCGATGAAAGGTCGAGACTTGTTACAGTTGATAAGGTTGGTGGTCCTGGAGAAAACTATGACGATCTTGCTGCTTCTTTGCCCAATGATGATTGTAGATATGCTGTCTTTGACTTTGATTTTGTCACTGTTGATAATTGTCGCAAGAGCAAGATCTTCTTCATTGCATGGTCTCCAACAGCATCAAGGATAAGAGCAAAGATGCTATACGCAACATCAAAAGATGGGTTGAGAAGAGCTTTGGATGGAATATCATATGAACTTCAAGCAACCGATCCAACTGAAATGGGATTTGATGTAATTCAAGACAGAGCCAAATAG 432 0.4028 MAMAFKMATTGMWVTEECKNSFMEMKWKKVHRYIVFKIDERSRLVTVDKVGGPGENYDDLAASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKMLYATSKDGLRRALDGISYELQATDPTEMGFDVIQDRAK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02206 143 PANTHER COFILIN-RELATED 5 143 IPR017904 GO:0015629|GO:0030042
Car06g02206 143 PANTHER ACTIN DEPOLYMERIZING FACTOR 5-RELATED 5 143 - -
Car06g02206 143 SMART adf_2 16 143 IPR002108 GO:0003779
Car06g02206 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
Car06g02206 143 SUPERFAMILY Actin depolymerizing proteins 6 141 - -
Car06g02206 143 CDD ADF_cofilin_like 10 142 IPR017904 GO:0015629|GO:0030042
Car06g02206 143 Gene3D Severin 2 143 IPR029006 -
Car06g02206 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 140 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02206 Car-Chr6 22615722 22616765 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02206 K05765 - gmx:100801857 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02206 06 22615722 22616765 Car06g02206 06 22615722 22616765 ECH