Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02202 ATGGATCTGTTAACATCCACTTATATCACTCTCACTGCCCTTCTTTTTCTCACTCCCAAAGGTGTAACTGGTTCTACCTTCACATTTGTGAACAGATGCGATTACACAGTATGGCCAGGGATTCTAGCAAATGCCGGTACCCCAACACTCGGAAGCACCGGTTTTGAACTCCCCCAAGAAACTTCCCGTACTTTTCAAGCTCCCGCCGGTTGGTCCGGCCGGTTCTGGGCCCGAACCGGTTGCAACTTCGACAGATCCGGTTCCGGTTCATGTCTCACCGGAGACTGCGGTTCCGGCATGATTGAATGCAACGGTGCCGGAGCTGCTCCTCCGGCTACCCTCGCAGAGTTCACTCTTGGAACTATTGGACAAGACTTCTACGACGTGAGTCTCGTCGACGGTTACAATCTTCCAATGATTGTGGAAGGTACGGGTGGGTCGGGTTCGTGTGCGTCGACTGGGTGTACGTCGGATCTGAACCAACAATGTCCGGCGGAGTTGAGAGCTTCTGATGGAAGCGCGTGTAAGAGCGCGTGTGAGGCTTTTGGAAGTCCTGAGTATTGTTGTAGTGGCGCGTATGGTTCACCGGATACTTGTAGGCCTTCTATTTACTCGGAGATGTTTAAGGCAGCTTGCCCTAGATCGTATAGCTACGCATACGATGATGCTACGAGTACTTTTACTTGTACTGCTGCGGATTATACCGTTACCTTTTGTCCATCTTCTCCAAGTAAAAAATCATCACAATATCCAAGCCCAATGACATCAACAACATTACCAGGGACAGGGACAGGATTAGGGACTCCTCAGATTGGAACAGGGTCCGAAGGGGGAGTGGTATACACAGGCACAGACACTCCAATTGGGTATTCAGTTCCTGTTTCTGGAGGAGAGACCATGCTTGCGGATGGATCATATTTAGCTGGTTTGGCCATGGGAGACTCATCTACAACATCTTTCTCTGCGTTTGTTTACTCCTTTGCTTTTTTGCTTATTATCTTATTGTTTTAG 1011 0.4916 MDLLTSTYITLTALLFLTPKGVTGSTFTFVNRCDYTVWPGILANAGTPTLGSTGFELPQETSRTFQAPAGWSGRFWARTGCNFDRSGSGSCLTGDCGSGMIECNGAGAAPPATLAEFTLGTIGQDFYDVSLVDGYNLPMIVEGTGGSGSCASTGCTSDLNQQCPAELRASDGSACKSACEAFGSPEYCCSGAYGSPDTCRPSIYSEMFKAACPRSYSYAYDDATSTFTCTAADYTVTFCPSSPSKKSSQYPSPMTSTTLPGTGTGLGTPQIGTGSEGGVVYTGTDTPIGYSVPVSGGETMLADGSYLAGLAMGDSSTTSFSAFVYSFAFLLIILLF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02202 336 PANTHER OS03G0233200 PROTEIN 8 262 IPR001938 -
Car06g02202 336 SMART tha2 27 240 IPR001938 -
Car06g02202 336 SUPERFAMILY Osmotin, thaumatin-like protein 26 241 IPR037176 -
Car06g02202 336 Gene3D Thaumatin 25 240 IPR037176 -
Car06g02202 336 ProSiteProfiles Thaumatin family profile. 24 240 IPR001938 -
Car06g02202 336 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 8 262 - -
Car06g02202 336 Pfam Thaumatin family 31 240 IPR001938 -
Car06g02202 336 CDD TLP-PA 26 239 - -
Car06g02202 336 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Car06g02202 336 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Car06g02202 336 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Car06g02202 336 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Car06g02202 336 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Car06g02202 336 MobiDBLite consensus disorder prediction 242 264 - -
Car06g02202 336 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02202 Car-Chr6 22555733 22558415 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02202 6 248 Receptor kinase-like Gene Family AT5G38280 46.718 2.23e-75 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02202 - - cam:101493007 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02202 06 22555733 22558415 Car06g02202 06 22555733 22558415 ECH