Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02192 ATGGGTTCTGAGGTCTCCAAACAAATCGAAAAACGAAGGACAATCCAAACAGAAGAGAAAACTTTGTCTGTTCTAAAAAACTTATTAGGAGAAAACTACCCTGGCTATGATTACCACCCTTCAGACAGAAAAAATTGGATGTCTAATCTCAACCCTGAGAAACTTAAGATCAACATGATAGTTTGGCCTGGAACCCATGATTCTGCAACCAACAAAATTGGCATACCAGGTATATCTCGCCCTTTTGCCCAATGTCAATACTTATCCATCTACCACCAACTTGTGAGAGGAACAAGAGTATTCGACATTCGCGTGCAGGAGGATCGAAGAGTTTGCCACGGAATTCTCCTCACATACAGCGTAGACATTGTCATCAAAGACATCAAAAAGTTCTTATCAGAAACCGAGTCTGAAATCATCGTTCTCGAGGTTAGAACTGAGATCGGACATAATGATCCGTTAGAATTCGATAAGTATCTTGAAGAACAACTAGGTGAGTACCTGATTCACCAAGATGATTCTGTTTTTGACAAGACTATTGCAGATGTGTTACCAAAAAGAGTTATATGCGTTTGGAAGCCGAGAAAATTGGAACAACCGAAAGCTGGAAGTAGCCTTTGGAGTGCAGGGTATCTAAAAGATGATTGGATCAATACAGATTTTCCAGCAACAAAATTTGAGAGCAATATGAAGTATTTGAGGGAACAAGAACCTGTTGTGTCAAGAAAATACTTCTATAGAGTTGAGAATACTGTTACACCTGTGCCAGATAACCCGGTTTTGTGTGTGAAACCTGTCACACAACGAATTCATGGATATGCAAGGCTTTTTATTAGTCAGTGTTTCTCCAAAGGGTGTGGTGATAGATTGCAGATATTTTCTACGGATTTTATAGACATAGATTTTGTTGATGCATGTGTTGGACTCACCCATGCAAGGGTTGAGGGTAAAGCATGA 957 0.3971 MGSEVSKQIEKRRTIQTEEKTLSVLKNLLGENYPGYDYHPSDRKNWMSNLNPEKLKINMIVWPGTHDSATNKIGIPGISRPFAQCQYLSIYHQLVRGTRVFDIRVQEDRRVCHGILLTYSVDIVIKDIKKFLSETESEIIVLEVRTEIGHNDPLEFDKYLEEQLGEYLIHQDDSVFDKTIADVLPKRVICVWKPRKLEQPKAGSSLWSAGYLKDDWINTDFPATKFESNMKYLREQEPVVSRKYFYRVENTVTPVPDNPVLCVKPVTQRIHGYARLFISQCFSKGCGDRLQIFSTDFIDIDFVDACVGLTHARVEGKA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02192 318 Pfam Phosphatidylinositol-specific phospholipase C, X domain 83 174 IPR000909 -
Car06g02192 318 SUPERFAMILY PLC-like phosphodiesterases 42 309 IPR017946 GO:0006629|GO:0008081
Car06g02192 318 CDD PI-PLCXDc_plant 33 313 - -
Car06g02192 318 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 7 315 - -
Car06g02192 318 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 310 IPR017946 GO:0006629|GO:0008081
Car06g02192 318 SMART plcx_3 51 193 IPR000909 -
Car06g02192 318 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 57 185 - -
Car06g02192 318 PANTHER UNCHARACTERIZED 7 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02192 Car-Chr6 22408318 22409799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02192 1 318 Acyl Lipid Metabolism Gene Families AT4G38690 72.327 3.03e-180 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02192 - - lja:Lj3g3v3500050.1 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02192 06 22408318 22409799 Car06g02192 06 22408318 22409799 ECH