Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02188 ATGAGCCTAGTATTCCATATTTGTTTCGATTCGACCAATCGAAATCCAAGAATGGGAACAATAATGAATGTTTGTGTTTGTCTGGTCTTATTAGCAGTTGCTTTTAAAGGTTTGATGAATGCAAATGCAATAGATAAATGGTCAGAGTTTGCAATTAGTGAAGCCACCATAGAGAACATACAAGAAGCCTTCACCCGAAAGGACCTCACTTCAAGACAACTCGTTGACTTTTACTTACAACGAATCGAGGCCCTCAATCCCATACTTAGCGCTGTATTGGAAATCAATCCTGACGCGCGAGATCAAGCGGACAAGGCTGATTGCGAGAGACTAGAAGATCACGACCGTTCGTTTCTACACGGGATTCCTGTTTTGATCAAGGACAGCATCGCGACCTTTGATAAACTCAACAATACGGCGGGGTCGTATGCATTGCTTGGGTCAAAGGTTCCACGTGATGCGCACGTGGTTTCTAAGCTCAGGGATGCTGGTGCTATCATTCTTGGCAAAACTACTCTCTCAGAGTGGTATGGGGTTCGTTCTACTGCTATGCCAGATGCTTGGTGCGCTAGAGCTGGATTTTCTTTGAATCCTTATGTGAAATCCAAAAGTCCATGCGGGTCTAGCTCTGGATCTGCTATTTCAGTGGCAACTAACATGGTTGCAGTTTCTCTGGGGACTGAAACAGATGGTTCAATTATCTGTCCAGCTGATCACAACTCAGTTGTGGGGATCAAGCCAACTGTTGGACTCACTAGCAGGGCTGGTGTCATACCAATTTCACCTCGTCAAGATACTATTGGTCCAATATGTAGGACAGTCTCAGATGCAGTTCATGTGCTTGATGTAATTGTTGGGTTTGACCCTAGAGATTCTGAGGCTACAAAGTCAGCAGCTCAGTTTATACCTCCAGGTGGTTATAAGCAATTCCTCAATAAACAAGGCCTCCAAGGAAAGAAAATAGGTGTTTTGAGGGATCCATTTTTGATTCCTTATGAGGGTTCCGATGTCATTTCCATCTTTGAGGATCATCTGAATATTTTGAGAGAAAGAGGTGCAACAGTGGTGGATAATTTGGAAATAGAAAATTTAAGCATCATTCTCAACCCTTTCCAAAGTGGTGAAATGGTAACCTTACTTGCTGAATTCAAGTTGTCCATCAACAAATATCTGCAGGAGCTCATATATTCTCCTGTGAGGTCTCTAGCTGAGATCATAGAATTCAACATCAATAACCCTCATTTAGAAAAGACTAATGAGTATGGGCAAGATTTATTTATTGCATCAGAAATGACCAATGGATTTGGAAAAAGGGAAATTGAGGCAATGAAGATGGTGGAGCAATTGTCACAAAATGGATTTGAGAAGCTGATGAAGAAGAATCGATTCGATGCATTGTTGACCATAGGCATCGATGTTGCTCCAATGCTGGCAATTGGAGGCTATCCTGCAATAACTGTCCCAGCTGGGTATGATAGTGAAGGAATGCCATTTGGGATATGTTTTGGAGGGTTAAAGGGAACAGACCCAAAACTTATTGAAATTGCTTATGACTTTGAACAAGCCACCCAGGCAAGGAATCCACCCCATCGCTTCTCATTCACATGA 1608 0.4248 MSLVFHICFDSTNRNPRMGTIMNVCVCLVLLAVAFKGLMNANAIDKWSEFAISEATIENIQEAFTRKDLTSRQLVDFYLQRIEALNPILSAVLEINPDARDQADKADCERLEDHDRSFLHGIPVLIKDSIATFDKLNNTAGSYALLGSKVPRDAHVVSKLRDAGAIILGKTTLSEWYGVRSTAMPDAWCARAGFSLNPYVKSKSPCGSSSGSAISVATNMVAVSLGTETDGSIICPADHNSVVGIKPTVGLTSRAGVIPISPRQDTIGPICRTVSDAVHVLDVIVGFDPRDSEATKSAAQFIPPGGYKQFLNKQGLQGKKIGVLRDPFLIPYEGSDVISIFEDHLNILRERGATVVDNLEIENLSIILNPFQSGEMVTLLAEFKLSINKYLQELIYSPVRSLAEIIEFNINNPHLEKTNEYGQDLFIASEMTNGFGKREIEAMKMVEQLSQNGFEKLMKKNRFDALLTIGIDVAPMLAIGGYPAITVPAGYDSEGMPFGICFGGLKGTDPKLIEIAYDFEQATQARNPPHRFSFT 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02188 535 Gene3D Amidase signature (AS) domain 36 530 IPR036928 -
Car06g02188 535 PANTHER C869.01-LIKE PROTEIN, PUTATIVE-RELATED 33 532 - -
Car06g02188 535 Pfam Amidase 74 512 IPR023631 -
Car06g02188 535 PANTHER AMIDASE 33 532 - -
Car06g02188 535 SUPERFAMILY Amidase signature (AS) enzymes 52 530 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02188 Car-Chr6 22360090 22362681 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02188 49 291 Acyl Lipid Metabolism Gene Families AT5G07360 32.377 1.51e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02188 K01426 - pop:7477870 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02188 06 22360090 22362681 Car06g02188 06 22360090 22362681 ECH