Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02170 ATGTCTTCCCCATCTTCCAAAACCCTAATCGATGCGTTCGATCGAGCTTCCAAGCGCTTGAAACCCAACGACAATGTCACCGAGTCCTCCTCTTCCTCTCTCACCGCGGACCAAAAATCGCGAATCGAATACAACAAGAAACTCGCTATGTCCAAGAAGAACCTCAAAATCTGCACCGAAAGGGTTTCCTTACACAAAGCTGCGGGTTGCGTGAAACTAGATGAGTTGCTTGTTGAGGAGTCTTGGTTGGAAGCTTTACCGGGAGAGTTTCAGAAACCCTACGCTGTTAATCTTTTCAAGTTTGTGGAAACGGCTATTTGTAGCGGGGATGGTTCTGTATTTCCGCCTCAGCATTTGGTTTTCAATGCTCTCAATACTACCCCTTTTCATTCTGTCAAGGCTGTGATTCTCGGCCAGGACCCTTATCACGGACTTGGTCAAGCAATGGGGCTTTCATTTTCGGTCCCCGAGGGAGTCAAAGTTCCATCCAGTTTGGTAAATATATTTAAGGAGCTCAAGCAAGACCTTGGCTGTTCGATTCCATCTCATGGTAATCTTGAAAAATGGGCTGTGCAGGGTGTTCTCTTACTCAATGCTGTTCTTACAGTCAGGAAGCACCAACCAAATTCTCATGCAAAAAAAGGCTGGGAACAATTTACCGATGCTGTTATCAAGACAATCTCACAGAAGAAGGAAGGGGTCGTATTTCTGTTGTGGGGAAAGTCTGCTCAGGAGAAACTTAGTTTAATTGATGCAACCAAACATCATATTCTACAAGCTGCACATCCTTCTGGGTTGTCTGCAAATAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCGAACTAACCAACATCTGGAGCAAATGGGGATTGATCCCATAGATTGGCAACTATAA 894 0.453 MSSPSSKTLIDAFDRASKRLKPNDNVTESSSSSLTADQKSRIEYNKKLAMSKKNLKICTERVSLHKAAGCVKLDELLVEESWLEALPGEFQKPYAVNLFKFVETAICSGDGSVFPPQHLVFNALNTTPFHSVKAVILGQDPYHGLGQAMGLSFSVPEGVKVPSSLVNIFKELKQDLGCSIPSHGNLEKWAVQGVLLLNAVLTVRKHQPNSHAKKGWEQFTDAVIKTISQKKEGVVFLLWGKSAQEKLSLIDATKHHILQAAHPSGLSANRGFFGCRHFSRTNQHLEQMGIDPIDWQL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02170 297 ProSitePatterns Uracil-DNA glycosylase signature. 133 142 IPR018085 GO:0006281|GO:0016799
Car06g02170 297 Hamap Uracil-DNA glycosylase [ung]. 79 296 IPR002043 GO:0004844|GO:0006281|GO:0006284
Car06g02170 297 PANTHER URACIL-DNA GLYCOSYLASE 12 297 IPR002043 GO:0004844|GO:0006281|GO:0006284
Car06g02170 297 Gene3D - 59 297 IPR036895 -
Car06g02170 297 TIGRFAM ung: uracil-DNA glycosylase 80 289 IPR002043 GO:0004844|GO:0006281|GO:0006284
Car06g02170 297 Pfam Uracil DNA glycosylase superfamily 129 282 IPR005122 -
Car06g02170 297 SUPERFAMILY Uracil-DNA glycosylase-like 76 297 IPR036895 -
Car06g02170 297 SMART UDG_2_a 125 285 - -
Car06g02170 297 CDD UDG-F1-like 94 295 IPR002043 GO:0004844|GO:0006281|GO:0006284
Car06g02170 297 SMART UDG_2 125 285 IPR005122 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02170 K03648 - gmx:100818241 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02170 06 22193711 22197931 Car06g02170 06 22193711 22197931 ECH