Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02169 ATGTCGGATCTTGAGGCTCCCCTGCGTCCAAAGAGGAAGAAGGTTTGGGTGGACTATTTTGTTAAGTTTCGATGGATACTTGTTATTTTTGTGGTTCTTCCCATTTCCTTCACACTTTATTTCCTTACATATCTCGGGGATGTGAGATCTGAGTGGAAGTCGTATAAGACGCGGCAGAAGGAACACGATGACAATGTCCAGAAGGTCGTCAAACGTCTCAAACAGAGGAATCCCTCAAAGGACGGGCTTGTCTGCACCGCCCGTAAGCCATGGATTGCAGTTGGGATGAGAAATGTTGACTATAAGAGAGCTCGTCATTTTGAAGTTGATCTATCTGCTTTCAGGAACATACTTGAAATCGACCAAGAGCGAATGATTGCCAGAGTAGAGCCTCTTGTCAACATGGGGCAGATCACCAGGGTGACTGTGCCTATGAATCTATCACTTGCTGTGGTTGCTGAGCTTGATGATCTCACTGTTGGTGGCCTCATAAATGGTTATGGAATAGAAGGAAGTTCCCACAAATATGGCCTTTTTTCTGACACTGTTGTGTCCTACGAAATTGTTTTGGCCGATGGATCTCTTGTTAAAGCCACCAAGGACAATGAGTACTCTGATCTCTTCTACGCTATTCCGTGGTCTCAGGGAACACTTGGGCTTCTTGTTGCTGCCGAGATCAAGCTTATACCCATTAAGGAGTACATGAAGTTAACCTATAAACCAGTTGTTGGTAACCTGAAAGATATTGCACAGGCATATGCGGATTCTTTTTCCCCCAGAGATGGGGACCAGGATAATGATGAGAAGGTTCCTGACTTTGTTGAAACTATGATTTATACGCGAACACAAGCTGTGTGCATGACAGGGAGATATGCTTCCAAAGAAGAGGCCAAGAAGAAGGGGAATAAGATTAACAGTGTTGGCTGGTGGTTCAAACCCTGGTTCTACCAACATGCAGAGACAGCACTCAAGAAAGGACTTTTTGTAGAATACATTCCTACCAGAGAATATTATCACAGGCACACAAGGTGTTTGTATTGGGAGGGAAAGCTTATCCTCCCATTTGGTGATCAATGGTGGTTTAGGTTTCTGTTTGGCTGGTTGATGCCACCAAAGGTTTCTCTGCTCAAGGCAACTCAAGGTGAAGCTATAAGAAACTATTACCATGAAATGCATGTTATCCAAGACATGCTTGTTCCTTTGTACAAGGTGGGAGATGCTCTAGAATGGGTTGACCGCGAGATGGAGATCTACCCCATTTGGCTCTGCCCACACAAACTGTTCAAGCTGCCTGTCAAAACTATGATTTACCCAGAAGCCGGCTTCGAGTTGCATCGCAGGCAGGGAGACACACAAACTGCTCAAATGTTCACAGATGTTGGAGTTTACTATACACCGGGTCCTGTGTTTAGGGGTGAGGTGTTTGATGGTGCAGACGCAGTGCGTAGAATGGAGAACTGGATGATCGAAAATCATTGTTTCCAGCCACAGTATGCTGTGTCTGAGCTGAACGAGAAAAACTTCTGGAGGATGTTTGATGCGGGGCTATACGAGCATTCTAGGAGGAAGTATGGAGCTGTTGGAACCTTCATGAGTGTGTACTACAAATCAAAGAAGGGCAGGAAAACTGAGAAGGAGGTGAGTGAAGCTGAGCAAGCACACCTTGAAACTGCTTATGCAGAAGTTGATCAACCAGTAGACTGA 1704 0.4519 MSDLEAPLRPKRKKVWVDYFVKFRWILVIFVVLPISFTLYFLTYLGDVRSEWKSYKTRQKEHDDNVQKVVKRLKQRNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILEIDQERMIARVEPLVNMGQITRVTVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHKYGLFSDTVVSYEIVLADGSLVKATKDNEYSDLFYAIPWSQGTLGLLVAAEIKLIPIKEYMKLTYKPVVGNLKDIAQAYADSFSPRDGDQDNDEKVPDFVETMIYTRTQAVCMTGRYASKEEAKKKGNKINSVGWWFKPWFYQHAETALKKGLFVEYIPTREYYHRHTRCLYWEGKLILPFGDQWWFRFLFGWLMPPKVSLLKATQGEAIRNYYHEMHVIQDMLVPLYKVGDALEWVDREMEIYPIWLCPHKLFKLPVKTMIYPEAGFELHRRQGDTQTAQMFTDVGVYYTPGPVFRGEVFDGADAVRRMENWMIENHCFQPQYAVSELNEKNFWRMFDAGLYEHSRRKYGAVGTFMSVYYKSKKGRKTEKEVSEAEQAHLETAYAEVDQPVD 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02169 567 Gene3D - 110 231 IPR016169 -
Car06g02169 567 SUPERFAMILY FAD-binding/transporter-associated domain-like 105 231 IPR036318 GO:0050660
Car06g02169 567 Pfam FAD binding domain 109 198 IPR006094 GO:0050660
Car06g02169 567 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, BULB-TYPE LECTIN DOMAIN, FAD-BINDING, TYPE 2-RELATED 1 564 - -
Car06g02169 567 ProSiteProfiles PCMH-type FAD-binding domain profile. 45 231 IPR016166 GO:0071949
Car06g02169 567 PANTHER 24-DEHYDROCHOLESTEROL REDUCTASE 1 564 IPR040165 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02169 K09828 - gmx:100814521 1101.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02169 06 22172412 22175907 Car06g02169 06 22172412 22175907 ECH