Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02168 ATGATTCTTCAACAAGCTTCTCCCACTTTTCACTTTCACTTCTCTCTCTGTCCCTGcaacaacaacaacaacaaTGATGGTATTTCTTCCAATACTCTCCTTTCCTTTCCCCTTTCCAAAACCATGAAGAAAAAACGCTTCATTTCAAATTATTATTACTCCAATCGCAAATTCCGTAGAAGAAAATGGAGTATTCACTCCTGTTCAATTCCCAAACAAGCTTCGAATTGGAAGAACCCTCAATTCGCCAATACAACAACAAGGGGTGCTAAAAGTTTCGTTCTTGATAGAATTTCAAATGATGATAATGAACTTGAAGCTGCTAACAATGAGATGCAAGAGTCATCACAGGTTCAATTGGGTTCAAATTTCACTACTTTTCAAGAAGATCCAATTGTGGATAAGCTCAGAACTCAATTGGGTGTTATTCACCCGATTCCGTCGCCTCCGATTAACCGAAACGTAgttggtttgtttgtgttttttttctttgttggtgttgtttttgATAAATTATGGACTTTTAGGAGAAGGAAGAACAAAGTTAGTAGTAGTGAAGATAGTTTGCGTGGTGTGTGGCCACAGGTTCCTACTAGTTTTTCTTTGTTTTTGGAAAAGGATTTGCAGAGGAAAGAATCGGTTGAATGGGTGAACATGGTTTTGGGGAAGTTGTGGAAGGTTTATAGAGGTGGACTTGAGAATTGGATTATTGGGTTACTTCAGCCTGTTATTGATGATCTACAGAAGCCTGATTATGTTGAAAGGGTTGAGATTAAGCAATTCTCATTAGGGGATGAGCCTTTGTCTGTTAGAAATGTTGAACGCAGGACTTCTCGCCGTGTTAATGATTTGCAGTACCAGATAGGCCTTAGGTACACTGGAGGTGCTCGCATGTTGTTAATGCTTTCTCTGAAATTTGGCATTTTTCCAATAGTTGTACCAGTTGGTGTTCGGGATTTTGACATTGATGGTGAACTTTGGGTAAAGTTGCGACTAATACCAACAGAACCTTGGGTGGGAGCTGCTTCGTGGGCTTTTGTTTCACTTCCAAAGATCAAGTTTGAGCTTTCACCATTTCGTTTGTTCAATTTAATGGCAATTCCAGTTCTCTCAATGTTTTTGACCAAACTTCTTACAGTAGATTTACCTAAACTATTTGTACGGCCAAATAAAATTGTTTTGGATATCCAAAAGGGAAAAGCTGTTGGTCCCGTTGCTGATGGTGTTAAATCGGGAGAAATGCAAGGAAACATGGATTCTGTTGGTGAACTATCAGTCACTCTTGTGGATGCTCGAAAGCTTCCTTATATTTTTGGTAAGACAGATCCTTATGTTATACTTAGCCTTGGAGATCAAACCATACGCAGCAAAAAGAACAGTCAGACTACTGTTATTGGGCCCCCTGGAATGCCAATTTGGAATCAGGATTTCCATATGCTTGTTTCCAACCCTAAAAAGCAGAAGTTAAGTATCCAAGTAAAAGACGCACTGGGATTTGCAGATTTGACTATTGGTACAGGAGAGGTTGATTTGGGATCTCTTCAAGATACCGTACCAACAGACAGAATTGTGGTTTTACAAGGGGGTTTGGGGTTTTTACGGAAGGGATCATCTGGGGAGATATTGCTTAGGCTAACTTATAAAGCATATGTGGAGGATGAGGAAGATGACATGACCGAGGAGGATTCCATTGATATAGATGTTTCGGATGATGAGTTATCGGATACAGAAGAAGCAAATAACCCCGATAAGAAGGGTCTAAGAGATTCTGCGTACCAAACAGATAAAGAATCATTTATGGATGTTTTGGCTGCATTAATTGTTAGCGAAGAATTTCAAGGTATAGTAGCATCTGAAGCAGGGTTTACCAAAGGTTTGGATAATGGCTCAAATATAGGGCCTAAAGTATCAAAATCTCCTGTTGCCAATGCGGAATCAACTCCTAGTTCTGATAATTCTCAAGGTTCTGGAGGATCAACCTTAATTTGGCTTGCTGTGATTACTAGCATAGCGGTACTAATTGCTGTCAATATCAGTGGTTCAAGTATCTTCAATCCTTAA 2061 0.3857 MILQQASPTFHFHFSLCPCNNNNNNDGISSNTLLSFPLSKTMKKKRFISNYYYSNRKFRRRKWSIHSCSIPKQASNWKNPQFANTTTRGAKSFVLDRISNDDNELEAANNEMQESSQVQLGSNFTTFQEDPIVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFVGVVFDKLWTFRRRKNKVSSSEDSLRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGLENWIIGLLQPVIDDLQKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIFPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTVDLPKLFVRPNKIVLDIQKGKAVGPVADGVKSGEMQGNMDSVGELSVTLVDARKLPYIFGKTDPYVILSLGDQTIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPKKQKLSIQVKDALGFADLTIGTGEVDLGSLQDTVPTDRIVVLQGGLGFLRKGSSGEILLRLTYKAYVEDEEDDMTEEDSIDIDVSDDELSDTEEANNPDKKGLRDSAYQTDKESFMDVLAALIVSEEFQGIVASEAGFTKGLDNGSNIGPKVSKSPVANAESTPSSDNSQGSGGSTLIWLAVITSIAVLIAVNISGSSIFNP 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02168 686 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 210 397 IPR031468 GO:0008289
Car06g02168 686 Pfam C2 domain 422 517 IPR000008 -
Car06g02168 686 MobiDBLite consensus disorder prediction 570 589 - -
Car06g02168 686 ProSiteProfiles C2 domain profile. 410 524 IPR000008 -
Car06g02168 686 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 15 686 - -
Car06g02168 686 Coils Coil 95 118 - -
Car06g02168 686 Gene3D C2 domain 405 550 IPR035892 -
Car06g02168 686 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 422 549 IPR035892 -
Car06g02168 686 SMART C2_3c 423 523 IPR000008 -
Car06g02168 686 MobiDBLite consensus disorder prediction 630 656 - -
Car06g02168 686 MobiDBLite consensus disorder prediction 628 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02168 Car-Chr6 22155795 22162537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02168 422 556 Acyl Lipid Metabolism Gene Families AT4G13550 29.710 9.91e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02168 - - adu:107477171 981.089