Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02165 ATGGCGCAACCACCTCTCATTGGAGAAACGCCTATTTCTATCCCTAATTCTTCCTCTTCTTCCGCAACTCCTGCAACATCACCGGCGGCACCAATCTCTTATGGCGTCAATCAAAACGTCAACGCTTCTGGGAATTCTCAACAGTCATCTTCACATTCTGGGATGAAACCTAATTCGGGTGTGAATCCTCCACTAGTTCCTGGTTTCCCTCCACGTGCTGCCACCCCTTCATTTTCATATAACGTTTCCCAAAGTGTAGCGCCTTTTACTGGAAACCAACATGCACAATCTAGCACTAACATGTCGGATTCCATTGCACAAGATTTTAGTAAAGTGTCATCTGCATCGAGTAACCCGCATCCTATTCCTGCTCCTACTTCTATATCTGCAATGCCGCCACCCTCTGACCCTAATTACCGGCCAACTACTTTATGGATGCCAACTGCCCCAACTTTTCCTGTCCATACTTTAATGCCTGGTACTCCTGGTCCTCCTGGGTTAGCAAAACCTGGGATAATGCCCTCCAATCCAGCTGCTCCATCCTCCAATACAGATTTTCCCTCATCTGCAGTACCGAGACCAAATATGCCAACTGCACCAATTGGATCAGATCCTAATGCGTCACATAAAGGCTTACCCTATCCACCGATACCTTCCATGGTTGCTCCCCCTCAGGGATTTTGGTTACAGCCTCCACAGATGAGTGGTGTACATAGGCCACCATTTCTTCAATATCCTGCTGCTTTTCCTGGTCCCTTTCCATTTCCAGCACGTGGTGTTACTCTACCTGCTGTTCCAGTACCTGATTCTCAACCTCCTGGCGTTACTCCTGTGGGTGCTGCTGGCATTTCTGCATTTTCTGTTTCCAGTCATCAGCTGAGGGGAACATCTGGTTTGCAGACAGTAGTAATTTCAGCACATGCTGATGACAAGAAACTAAATGCCACCGTGACACATAATGAGGATGCTGCTAATGATCAACTAGATGCTTGGACTGCCCACAAGACTGAAGCAGGGATTGTATACTATTATAATGCCTTGACAGGGGAATCAACATATGATAAACCTGCTGGATTTAAAGGGGAGGCTCACCAAGTTTCTGTGCAGCCGACTCCAGTTTCAGTGGTAGATTTGCCTGGTACTGATTGGCAATTGGTCTCTACTAGTGATGGGAAAAAATATTACTATAACAATCGAACCAAGACAAGCTGCTGGCAAATTCCAAATGAGGTGGCTGAATTGAAAAAAAAGCAGGATGGTGATGCTGCAAAAGATCATTTAATGCCAGTTCTAAATGCTACTGTATTGCCTGATAGAGGGTTTGGAATGGTTACACTGAATGCTCCGGCCATTACTACTGGTGGTCGTGATGCTGCAACTGTCAAACCCTTTAGTGTACAGAGCTCACCATCGGCACTGGATTTGATCAAGAAGAAGTTGCAGGAATCAGGAACACCTATCACATCCTCTTCTATTCCTATGCCATCAGTGCAACCAGGATCTGAATCAAATGGTTCAAAAGCAACCGACTCTACAGCCAAGAGCCTGCAAAATGATAATAGCAAAGATAGACAAAAAGATGCTAATGGTGATGCTAATGCCTCTGATACATCTTCAGATTCAGAAGACGAGGATAGTGGGCCTTCAAAGGAAGAGTGCATAAATCAATTTAAGGAGATGCTTAAGGAGCGAGGTGTGGCACCATTCTCCAAGTGGGAGAAAGAACTGCCAAAGTTCGTATTTGATCCTCGTTTTAAGGCCATCCCTAGTTATTCTGCTAGGAGATCCTTGTTTGAACATTACGTTAAAACTCGTGCGGAAGAAGAGCGCAAAGAAAAACGTGCAGCACAGAAGGCTGCAATTGAGGGATTTAAGCAGTTATTAGATGAAGCCTCAGAGGATATTAATCACAACACTGATTATCACACTTTTCGAAAGAAATGGGCGAACGATTCACGGTTTGAGGCATTGGACCGCAAGGAACGGGAGCACCTTCTGAACGAAAGAGTGCTTCCTTTGAAGAAAGCCGTTGAAGAAAAAGCTCAAGCAATGTGGGATGCAGCTGCTGCCGGTTTTAAGTCAATGCTTAAAGAACAAGGAGATATAACTTTTAACTCCCGTTGGTCCAGGATTAAAGAGAGTTTAAGGGATGACCCAAGATATAAATCTGTGAAACATGAGGATAGGGAAGTTTTGTTCAATGAGTATATATCCGAGTTGAAAGCTGCTGAACATGCAGCAGAACGAGAGAGCAGAGCTAAAAAGGAGGAGCAGGAGAAGCTGCGGGAGAGGGAACGGGAATTGCGTAAAAGGAAGGAAAGAGAAGAACATGAAATGGAAAGAGTACGATTAAAAATTCGAAGGAAGGAGGCAGTTACTTCCTTGCAAGCTTTACTTGTGGAGACAATCAAAGATCCAATGGCATCATGGACAGAATCGAAGCCTAAATTAGAGAAAGATCCTCAAGGACGTGCAACTAATTCTGATCTGGATTCAGCTGACATGGAAAAACTCTTTCGAGACCATATAAAGATGCTTCAGGAACGATGTGCACACGACTTTAGAGCTCTTCTGGCTGAAGTCTTGACTTCTGAAGCTGCATCTCAGGAAACCGACGATGGTAAAACAGTGCTCAATTCATGGTCTACGGCAAAACGTCTTTTAAAATCTGATCCAAGATATAACAAGTTTCCACGAAAAGATAGAGAAGCCTTGTGGCGCCGGTATGTAGAGGATATGCTGCGGCGGCAAAAGTCATCTCATGATTCAAAGGAAGATAAACATACAGATGCCAGAGGTAGAAATTCTCAACAATCTTCCAAACTTCCATTGGAATCAGGGAGATCTCATGAGAGACGATAA 2862 0.4441 MAQPPLIGETPISIPNSSSSSATPATSPAAPISYGVNQNVNASGNSQQSSSHSGMKPNSGVNPPLVPGFPPRAATPSFSYNVSQSVAPFTGNQHAQSSTNMSDSIAQDFSKVSSASSNPHPIPAPTSISAMPPPSDPNYRPTTLWMPTAPTFPVHTLMPGTPGPPGLAKPGIMPSNPAAPSSNTDFPSSAVPRPNMPTAPIGSDPNASHKGLPYPPIPSMVAPPQGFWLQPPQMSGVHRPPFLQYPAAFPGPFPFPARGVTLPAVPVPDSQPPGVTPVGAAGISAFSVSSHQLRGTSGLQTVVISAHADDKKLNATVTHNEDAANDQLDAWTAHKTEAGIVYYYNALTGESTYDKPAGFKGEAHQVSVQPTPVSVVDLPGTDWQLVSTSDGKKYYYNNRTKTSCWQIPNEVAELKKKQDGDAAKDHLMPVLNATVLPDRGFGMVTLNAPAITTGGRDAATVKPFSVQSSPSALDLIKKKLQESGTPITSSSIPMPSVQPGSESNGSKATDSTAKSLQNDNSKDRQKDANGDANASDTSSDSEDEDSGPSKEECINQFKEMLKERGVAPFSKWEKELPKFVFDPRFKAIPSYSARRSLFEHYVKTRAEEERKEKRAAQKAAIEGFKQLLDEASEDINHNTDYHTFRKKWANDSRFEALDRKEREHLLNERVLPLKKAVEEKAQAMWDAAAAGFKSMLKEQGDITFNSRWSRIKESLRDDPRYKSVKHEDREVLFNEYISELKAAEHAAERESRAKKEEQEKLRERERELRKRKEREEHEMERVRLKIRRKEAVTSLQALLVETIKDPMASWTESKPKLEKDPQGRATNSDLDSADMEKLFRDHIKMLQERCAHDFRALLAEVLTSEAASQETDDGKTVLNSWSTAKRLLKSDPRYNKFPRKDREALWRRYVEDMLRRQKSSHDSKEDKHTDARGRNSQQSSKLPLESGRSHERR 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02165 953 MobiDBLite consensus disorder prediction 1 72 - -
Car06g02165 953 Pfam FF domain 620 668 IPR002713 -
Car06g02165 953 Pfam FF domain 853 909 IPR002713 -
Car06g02165 953 Pfam FF domain 794 842 IPR002713 -
Car06g02165 953 Pfam FF domain 690 736 IPR002713 -
Car06g02165 953 Pfam FF domain 554 601 IPR002713 -
Car06g02165 953 ProSitePatterns WW/rsp5/WWP domain signature. 331 356 IPR001202 GO:0005515
Car06g02165 953 SUPERFAMILY WW domain 382 414 IPR036020 GO:0005515
Car06g02165 953 Gene3D FF domain 846 912 IPR036517 -
Car06g02165 953 Gene3D FF domain 785 845 IPR036517 -
Car06g02165 953 SUPERFAMILY FF domain 609 678 IPR036517 -
Car06g02165 953 MobiDBLite consensus disorder prediction 811 832 - -
Car06g02165 953 ProSiteProfiles FF domain profile. 550 604 IPR002713 -
Car06g02165 953 Coils Coil 737 792 - -
Car06g02165 953 MobiDBLite consensus disorder prediction 125 140 - -
Car06g02165 953 ProSiteProfiles FF domain profile. 847 912 IPR002713 -
Car06g02165 953 SUPERFAMILY FF domain 847 918 IPR036517 -
Car06g02165 953 SUPERFAMILY WW domain 330 361 IPR036020 GO:0005515
Car06g02165 953 MobiDBLite consensus disorder prediction 10 58 - -
Car06g02165 953 MobiDBLite consensus disorder prediction 809 832 - -
Car06g02165 953 CDD WW 331 356 IPR001202 GO:0005515
Car06g02165 953 MobiDBLite consensus disorder prediction 110 141 - -
Car06g02165 953 Gene3D FF domain 674 752 IPR036517 -
Car06g02165 953 Gene3D FF domain 535 615 IPR036517 -
Car06g02165 953 SUPERFAMILY FF domain 781 850 IPR036517 -
Car06g02165 953 ProSiteProfiles WW/rsp5/WWP domain profile. 383 410 IPR001202 GO:0005515
Car06g02165 953 SUPERFAMILY FF domain 545 610 IPR036517 -
Car06g02165 953 ProSiteProfiles FF domain profile. 682 739 IPR002713 -
Car06g02165 953 MobiDBLite consensus disorder prediction 484 550 - -
Car06g02165 953 Pfam WW domain 330 356 IPR001202 GO:0005515
Car06g02165 953 ProSitePatterns WW/rsp5/WWP domain signature. 383 408 IPR001202 GO:0005515
Car06g02165 953 Gene3D FF domain 616 673 IPR036517 -
Car06g02165 953 SUPERFAMILY FF domain 679 743 IPR036517 -
Car06g02165 953 SMART ww_5 326 358 IPR001202 GO:0005515
Car06g02165 953 SMART ww_5 378 410 IPR001202 GO:0005515
Car06g02165 953 ProSiteProfiles FF domain profile. 617 672 IPR002713 -
Car06g02165 953 MobiDBLite consensus disorder prediction 484 516 - -
Car06g02165 953 PANTHER TRANSCRIPTION ELONGATION REGULATOR HOMOLOG 99 946 - -
Car06g02165 953 MobiDBLite consensus disorder prediction 914 934 - -
Car06g02165 953 PANTHER TRANSCRIPTION ELONGATION REGULATOR 1 99 946 IPR045148 GO:0003712|GO:0070063
Car06g02165 953 SMART FF_2 550 604 IPR002713 -
Car06g02165 953 SMART FF_2 617 672 IPR002713 -
Car06g02165 953 SMART FF_2 788 845 IPR002713 -
Car06g02165 953 SMART FF_2 685 739 IPR002713 -
Car06g02165 953 ProSiteProfiles WW/rsp5/WWP domain profile. 325 358 IPR001202 GO:0005515
Car06g02165 953 CDD WW 381 410 IPR001202 GO:0005515
Car06g02165 953 Gene3D - 368 425 - -
Car06g02165 953 MobiDBLite consensus disorder prediction 747 780 - -
Car06g02165 953 MobiDBLite consensus disorder prediction 161 213 - -
Car06g02165 953 ProSiteProfiles FF domain profile. 788 845 IPR002713 -
Car06g02165 953 MobiDBLite consensus disorder prediction 176 191 - -
Car06g02165 953 MobiDBLite consensus disorder prediction 110 124 - -
Car06g02165 953 Gene3D - 326 367 - -
Car06g02165 953 MobiDBLite consensus disorder prediction 914 953 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02165 Car-Chr6 22118389 22136435 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02165 K12824 - gmx:100816454 1363.21