Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02164 ATGGAAATGCTCTTTCAGGAACATAGTATAAAGATCTTGGGGAAGTATCAGATAGGCCTTAGGTACACTGGAGGTGCTCGCATGCTGTTGATGCTTTCTCTGAAATTTGGCATTATTCCAATTGCTGTACCTGTTGGTGTTCGGGATTTTGACATTAATGGTGAACTTTGGGTGAAGTTGCGACTAATACCAACAGAACCTTGGATCAAAGCTAAAAAGCCTTCATGGAAAGTAGGATTTGAAGAACCCCAACTGGCGTCTGGTGATTGTGAATTTGGAACTACAAGAAAGGCCTGCAAAAATTGCACGTGTGGGAGGGCAGAAGAAGAGGAAAAAGTGTTGAAGTTAGGATTGACAGCAGAACAGATTAATAATCCTCAATCAGCTTGTGGCAGTTGTGGTTTAGGGGATGCTTTTAGATGCAGTACCTGCCCTTATAAGGGACTGCCTGCCTTCAAAATGGGCGAGAAGCTCCGTATTTTCAACAAGATATCATTAGACGAGTTAGAATTCACATGTTCAACAAATGAATCATCCTACGTGAATGAATCATTACTCTCAGAACTCTCTTCTCGTTTATCTCTCAAGCGAACCCTAATCAATCAATCACATATTCCCCTTTCTCCGTGCCGTGTGTTCTTCAAATCTCAGATTGTGAATGCAATAAGTGATGTACCGAAGAATCCAAGCTTGGAAGATGTGGAAACTCTCATTGGACTGGAATTAGGTAGTGCTATGCGAATTTCGGTTTTGAAATCGGATTCAACTTCTTTTGATGTGACGGTTATGAATAGGGCAACGGTGAAGGATTTGAAACTCGCCATAAAAAAGAAAGTCAATTACATGGAACAATCTAGTATGGGTCACCGCCATATTTCTTGGAGGAGTGTTTGGGCTAATTATTGCTTGTCATTCGATAATAACAAGCTCCTTAATGATGATGATGTACTTCAAAATTTTGGTGTGCGGAATAATTCTCAGGTTCACTTTGTCCCTTATGTCATGACAAAAGAATTCAGAAGACACTCAAGAAGAAGAAAGCATCGGTTTTTTCATGGTCTTAGTAAGCTTTCCTAA 1077 0.403 MEMLFQEHSIKILGKYQIGLRYTGGARMLLMLSLKFGIIPIAVPVGVRDFDINGELWVKLRLIPTEPWIKAKKPSWKVGFEEPQLASGDCEFGTTRKACKNCTCGRAEEEEKVLKLGLTAEQINNPQSACGSCGLGDAFRCSTCPYKGLPAFKMGEKLRIFNKISLDELEFTCSTNESSYVNESLLSELSSRLSLKRTLINQSHIPLSPCRVFFKSQIVNAISDVPKNPSLEDVETLIGLELGSAMRISVLKSDSTSFDVTVMNRATVKDLKLAIKKKVNYMEQSSMGHRHISWRSVWANYCLSFDNNKLLNDDDVLQNFGVRNNSQVHFVPYVMTKEFRRHSRRRKHRFFHGLSKLS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02164 358 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 223 356 - -
Car06g02164 358 Gene3D - 240 341 - -
Car06g02164 358 CDD Ubl_SNRNP25 245 331 IPR040610 -
Car06g02164 358 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 223 356 IPR039690 GO:0000398|GO:0005689
Car06g02164 358 SUPERFAMILY Ubiquitin-like 240 335 IPR029071 -
Car06g02164 358 Pfam Ubiquitin-like domain 246 333 IPR040610 -
Car06g02164 358 Pfam Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis 89 160 IPR046408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02164 Car-Chr6 22104339 22114663 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02164 K13153 - qsu:112002115 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02164 06 22104339 22114663 Car06g02164 06 22104339 22114663 ECH